Skip to content

Issues: nf-core/tools

[Project] Schema extensions
#2429 opened Sep 21, 2023 by ewels
Open
Download: Fix support for Seqera Community Containers
#3179 opened Sep 24, 2024 by MatthiasZepper
Open 5
Renovate Dashboard 🤖
#2596 opened Dec 19, 2023 by renovate bot
Open
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

251 Open 815 Closed
251 Open 815 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Phase out the when directive enhancement
#3270 opened Nov 4, 2024 by nictru
Update base to use new previous task
#3269 opened Oct 31, 2024 by edmundmiller
Running prettier on new pipeline during pipelines create fails silently bug Something isn't working
#3266 opened Oct 30, 2024 by awgymer
CI Runs failing due to (potential) bug in utils method for fetching repo releases bug Something isn't working
#3264 opened Oct 30, 2024 by awgymer
Un-informative error message from strange linting runs bug Something isn't working
#3263 opened Oct 30, 2024 by fasterius
nf-core pipeline lint gives cryptic prettier error message bug Something isn't working
#3262 opened Oct 29, 2024 by marrip
7
create template GENERATE_DOWNSTREAM_SAMPLESHEETS for tools
#3259 opened Oct 29, 2024 by Joon-Klaps
@Joon-Klaps
Provide novel tooling for regulatory needs enhancement regulatory
#3258 opened Oct 29, 2024 by apeltzer
1
Pipeline creation should specify branch name when initialising git repository enhancement
#3254 opened Oct 28, 2024 by alexlyttle
Template fails linting/pre-commit bug Something isn't working
#3252 opened Oct 25, 2024 by alexlyttle
Modules meta.yml differentiate between tuple and single element channels bug Something isn't working linting modules Related to tools for working with DSL2 modules
#3248 opened Oct 24, 2024 by mirpedrol
5 tasks
@pmoris
nf-core pipelines bump-version doesn't consider skipped features bug Something isn't working
#3245 opened Oct 24, 2024 by mashehu
Adopt nf-test sharding
#3243 opened Oct 23, 2024 by edmundmiller
3
Add a separater between each module's set of diffs during 'preview changes' during module updates enhancement
#3239 opened Oct 23, 2024 by jfy133
@mashehu
1
nf-core pipelines launch CLI issue bug Something isn't working
#3222 opened Oct 14, 2024 by rhassaine
Add and lint module Renovate comments modules Related to tools for working with DSL2 modules
#3184 opened Sep 27, 2024 by ewels
4 tasks
Download: Fix support for Seqera Community Containers bug Something isn't working high-priority
#3179 opened Sep 24, 2024 by MatthiasZepper
5
Add ability to install a subworkflow composed nf-core and non-nfcore modules/subworkflows. enhancement high-priority
#3175 opened Sep 17, 2024 by kenibrewer 3.1
@jvfe
3
Add ability to install a nf-core module into a private module library enhancement high-priority
#3174 opened Sep 17, 2024 by kenibrewer 3.1
6
Comment in 'nf-core create-params-file --show-hidden' indicates hidden parameters are missing. Params are there bug Something isn't working
#3172 opened Sep 16, 2024 by FriederikeHanssen
Singularity container symlinks not consistently created bug Something isn't working download nf-core download
#3162 opened Sep 7, 2024 by muffato
1
@muffato
error_retry label not recognized as standard label for certain module structures bug Something isn't working good-first-issue linting
#3160 opened Sep 6, 2024 by Felix-Kummer
2
nf-core pipelines bump-version command should update pipeline version in nf-test snapshots enhancement
#3158 opened Sep 4, 2024 by maxulysse
modules update with patch deletes files in templates bug Something isn't working
#3157 opened Sep 3, 2024 by FriederikeHanssen
1
Schema: Support multi-line text inputs schema
#3145 opened Aug 28, 2024 by ewels
1
ProTip! no:milestone will show everything without a milestone.