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version bump
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EC2 Default User committed Mar 4, 2024
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17 changes: 17 additions & 0 deletions .nf-test.log
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Feb-27 21:54:16.881 [main] INFO com.askimed.nf.test.App - nf-test 0.8.4
Feb-27 21:54:16.895 [main] INFO com.askimed.nf.test.App - Arguments: [test, tests/main_pipeline_kallisto.test, --update-snapshot]
Feb-27 21:54:17.590 [main] INFO com.askimed.nf.test.App - Nextflow Version: 23.10.1
Feb-27 21:54:17.592 [main] INFO com.askimed.nf.test.commands.RunTestsCommand - Load config from file /home/ec2-user/scrnaseq/nf-test.config...
Feb-27 21:54:17.887 [main] INFO com.askimed.nf.test.commands.RunTestsCommand - Detected 1 test files.
Feb-27 21:54:18.162 [main] INFO com.askimed.nf.test.config.FileStaging - Copy directory '/home/ec2-user/scrnaseq/bin' to '/home/ec2-user/scrnaseq/.nf-test/tests/72e0d0f6b834ab79755c0f97ef8c4ca8/meta/bin'
Feb-27 21:54:18.164 [main] INFO com.askimed.nf.test.config.FileStaging - Copy directory '/home/ec2-user/scrnaseq/lib' to '/home/ec2-user/scrnaseq/.nf-test/tests/72e0d0f6b834ab79755c0f97ef8c4ca8/meta/lib'
Feb-27 21:54:18.164 [main] INFO com.askimed.nf.test.config.FileStaging - Copy directory '/home/ec2-user/scrnaseq/assets' to '/home/ec2-user/scrnaseq/.nf-test/tests/72e0d0f6b834ab79755c0f97ef8c4ca8/meta/assets'
Feb-27 21:54:18.171 [main] DEBUG com.askimed.nf.test.core.AbstractTest - Stage 0 user provided files...
Feb-27 21:54:18.174 [main] INFO com.askimed.nf.test.core.TestExecutionEngine - Started test plan
Feb-27 21:54:18.174 [main] INFO com.askimed.nf.test.core.TestExecutionEngine - Running testsuite 'Test Workflow main.nf' from file '/home/ec2-user/scrnaseq/tests/main_pipeline_kallisto.test'.
Feb-27 21:54:18.174 [main] INFO com.askimed.nf.test.core.TestExecutionEngine - Run test '72e0d0f6: test-dataset_kallisto_aligner'. type: com.askimed.nf.test.lang.pipeline.PipelineTest
Feb-27 21:55:36.281 [main] DEBUG com.askimed.nf.test.lang.extensions.SnapshotFile - Load snapshots from file '/home/ec2-user/scrnaseq/tests/main_pipeline_kallisto.test.snap'
Feb-27 21:55:36.305 [main] DEBUG com.askimed.nf.test.lang.extensions.Snapshot - Snapshots 'test-dataset_kallisto_aligner' match.
Feb-27 21:55:36.306 [main] INFO com.askimed.nf.test.core.TestExecutionEngine - Test '72e0d0f6: test-dataset_kallisto_aligner' finished. status: PASSED
Feb-27 21:55:36.308 [main] INFO com.askimed.nf.test.core.TestExecutionEngine - Testsuite 'Test Workflow main.nf' finished. snapshot file: true, skipped tests: false, failed tests: false
Feb-27 21:55:36.308 [main] INFO com.askimed.nf.test.core.TestExecutionEngine - Executed 1 tests. 0 tests failed. Done!
70 changes: 51 additions & 19 deletions modules.json
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18 changes: 15 additions & 3 deletions modules/nf-core/kallistobustools/count/main.nf
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98 changes: 98 additions & 0 deletions modules/nf-core/kallistobustools/count/tests/main.nf.test
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100 changes: 100 additions & 0 deletions modules/nf-core/kallistobustools/count/tests/main.nf.test.snap
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5 changes: 5 additions & 0 deletions modules/nf-core/kallistobustools/count/tests/nextflow.config
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2 changes: 2 additions & 0 deletions modules/nf-core/kallistobustools/count/tests/tags.yml
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