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busco changed their dl url...
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HadrienG committed Dec 20, 2019
1 parent 8592308 commit 54310f7
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -76,7 +76,7 @@ def helpMessage() {
Bin quality check:
--skip_busco Disable bin QC with BUSCO (default: false)
--busco_reference Download path for BUSCO database, available databases are listed here: https://busco.ezlab.org/
(default: https://busco.ezlab.org/datasets/bacteria_odb9.tar.gz)
(default: https://busco-archive.ezlab.org/v3/datasets/bacteria_odb9.tar.gz)
AWSBatch options:
--awsqueue The AWSBatch JobQueue that needs to be set when running on AWSBatch
Expand All @@ -100,7 +100,7 @@ params.multiqc_config = "$baseDir/conf/multiqc_config.yaml"
params.email = false
params.plaintext_email = false
params.manifest = false
params.busco_reference = "https://busco.ezlab.org/datasets/bacteria_odb9.tar.gz"
params.busco_reference = "https://busco-archive.ezlab.org/v3/datasets/bacteria_odb9.tar.gz"

ch_multiqc_config = Channel.fromPath(params.multiqc_config)
ch_output_docs = Channel.fromPath("$baseDir/docs/output.md")
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