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funannotate v1.4.2
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@nextgenusfs nextgenusfs released this 16 Jul 12:49
· 567 commits to master since this release
1.4.2
4952466
  • fix bug in train and update where script would die due to symlink error #189
  • for predict the --protein_alignments option now takes GFF3 input (not exonerate output). This is to make consistent with the --transcript_alignments. Scripts now write hints file for augustus from the GFF3 file.
  • similar to above, added funannotate util prot2genome which will run the diamond/exonerate mapping of proteins to the genome --> output is GFF3 file compatible with EVM. These data can then be passed to --protein_alignments
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