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@neuropoly

NeuroPoly

Ecole Polytechnique, Université de Montréal

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  1. gmseg gmseg Public

    Spinal cord gray matter segmentation using deep dilated convolutions.

    Jupyter Notebook 45 8

  2. domainadaptation domainadaptation Public

    Repository for the article "Unsupervised domain adaptation for medical imaging segmentation with self-ensembling".

    Python 43 9

  3. deep-active-learning deep-active-learning Public

    Implementation of active learning features for AxonDeepSeg software (axon-myelin segmentation)

    Jupyter Notebook 38 13

  4. axonseg axonseg Public

    Segment axon and myelin from microscopy data. Written in Matlab.

    MATLAB 19 12

  5. totalspineseg totalspineseg Public

    Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterative Algorithm.

    Python 19 1

  6. multiclass-segmentation multiclass-segmentation Public archive

    Repository for the code related to the NIH marmoset longitudinal segmentation project.

    Python 17 8

Repositories

Showing 10 of 59 repositories
  • coil-qa Public

    Python library to compute coil quality analysis metrics such as SNR, noise correlation matrix and g-factor maps.

    neuropoly/coil-qa’s past year of commit activity
    Python 0 MIT 0 4 0 Updated Nov 22, 2024
  • totalspineseg Public

    Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterative Algorithm.

    neuropoly/totalspineseg’s past year of commit activity
    Python 19 LGPL-3.0 1 12 3 Updated Nov 22, 2024
  • neuropoly/slicer-manual-annotation’s past year of commit activity
    Python 4 MIT 1 37 (7 issues need help) 1 Updated Nov 21, 2024
  • intranet.neuro.polymtl.ca Public

    NeuroPoly's lab manual

    neuropoly/intranet.neuro.polymtl.ca’s past year of commit activity
    HTML 4 7 46 11 Updated Nov 21, 2024
  • neuro.polymtl.ca Public

    NeuroPoly's Website

    neuropoly/neuro.polymtl.ca’s past year of commit activity
    Python 3 7 26 3 Updated Nov 21, 2024
  • cortical-surface64mT Public

    Pipeline for generating the cortical surface from Hyperfine pediatric brain MRI

    neuropoly/cortical-surface64mT’s past year of commit activity
    Shell 0 Apache-2.0 0 0 0 Updated Nov 20, 2024
  • segmentation-tools-awesome-list Public

    This awesome list refers to different 3D Slicer modules and other open source platforms/softwares/solutions availables for manual segmentation and classification workflows.

    neuropoly/segmentation-tools-awesome-list’s past year of commit activity
    0 MIT 0 0 0 Updated Nov 15, 2024
  • Susceptibility-Separation-Phantom Public

    This project aims to create and simulate a realistic phantom for susceptibility separation algorithm validation.

    neuropoly/Susceptibility-Separation-Phantom’s past year of commit activity
    MATLAB 5 MIT 1 3 0 Updated Nov 12, 2024
  • bibeasy Public

    Set of tools to manage academic bibliography

    neuropoly/bibeasy’s past year of commit activity
    Python 2 Apache-2.0 0 13 0 Updated Oct 29, 2024
  • template Public

    A framework for creating unbiased MRI templates of the spinal cord

    neuropoly/template’s past year of commit activity
    Python 5 MIT 4 17 0 Updated Oct 22, 2024