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[MNT] Remove deprecated Nipoppy docs #224

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5 changes: 5 additions & 0 deletions docs/data_prep.md
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# Preparing the phenotypic data

!!! tip "Looking for more general guidelines on how to organize your dataset?"

We recommend also checking out [Nipoppy](https://nipoppy.readthedocs.io/), a protocol for standardized organization and processing of clinical-neuroimaging datasets that extends [BIDS](https://bids-specification.readthedocs.io/en/stable/).
Neurobagel tools are designed to be compatible with data organized according to the Nipoppy specification, although you do not need to use Nipoppy in order to use Neurobagel.

To use the Neurobagel annotation tool,
please prepare the tabular data for your dataset as a single, tab-separated file (`.tsv`).

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