[REF] Change the linked examples to recipe repo

[surchs]

• Closes Switch local node setup instructions to use recipes repo #144

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[alyssadai]

Hey @surchs, sorry for the delay with this review!

The changes are looking good, but I noticed there are still a few remaining sections on this docs page that refer to files from the neurobagel/api repo (I did a quick search for "api repo" to double check), which should also be updated as part of this PR.

Since I can't seem to comment directly on lines that weren't changed, I've summarized these in my last comment below!

[surchs]

See also:

• [REF] Move vocabulary turtle file to recipes repo api#272
• [REF] Move vocab turtle file from api repo recipes#15

[alyssadai]

Thanks for the changes @surchs! Some final corrections below with regards to repo naming, and I think we're gtg 🧑‍🍳

[surchs]

The dead links check failing is expected, because these links are anticipating that neurobagel/recipes#15 will be merged as is.