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The public query tool at [query.neurobagel.org](https://query.neurobagel.org) | ||
queries the public Neurobagel federation API at [federate.neurobagel.org](https://federate.neurobagel.org) | ||
which provides access to all publicly accessible Neurobagel nodes. | ||
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To start running your own cohort queries, | ||
all you have to do is visit [query.neurobagel.org](https://query.neurobagel.org), | ||
enter your cohort criteria into the web interface, and click the "Submit" button. | ||
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## Public Neurobagel Nodes | ||
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At the moment, the following public Neurobagel nodes are available: | ||
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- **OpenNeuro**. This node contains a (growing) subset of the datasets on [OpenNeuro](https://openneuro.org/). | ||
You can query this node by selecting the "OpenNeuro" option in the query tool. | ||
The datasets you can find in this node have been annotated by the community and live in the | ||
[OpenNeuroDatasets-JSONLD](https://github.com/OpenNeuroDatasets-jsonld) GitHub organization. | ||
- **International Neuroimaging Data-sharing Initiative** (INDI): This node contains public datasets from the [INDI](https://fcon_1000.projects.nitrc.org/) project. | ||
You can query this node by selecting the "INDI" option in the query tool. | ||
At the moment, the following datasets are queryable in the INDI node: | ||
- [ABIDE 1](https://fcon_1000.projects.nitrc.org/indi/abide/abide_I.html) | ||
- [ABIDE 2](https://fcon_1000.projects.nitrc.org/indi/abide/abide_II.html) | ||
- [ADHD 200](https://fcon_1000.projects.nitrc.org/indi/adhd200/) | ||
- [Consortium for Reliability and Reproducibility](https://fcon_1000.projects.nitrc.org/indi/CoRR/html/) (CoRR) datasets. | ||
- **Quebec Parkinson Network**: This node contains the [Quebec Parkinson Network](https://rpq-qpn.ca/en/home/) datasets. | ||
Unlike the other two public nodes, the Quebec Parkinson Network node will not return participant level details. | ||
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All nodes except for the Quebec Parkinson Network node allow you to download both participant-level information | ||
and the corresponding imaging data (where available) for the cohorts you search. | ||
Downloading of imaging data is performed via [datalad](https://rpq-qpn.ca/en/home/). | ||
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## Private Neurobagel nodes | ||
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Nodes that are not purposefully made public are not accessible | ||
outside of the institute or network where they are deployed. | ||
If you are interested in deploying a Neurobagel node for your institution, | ||
please refer to our [deployment documentation](./getting_started.md) for more information. |
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