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App Structure
Sebastian Urchs edited this page Feb 21, 2022
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- Upload
- get a
participants.tsv
file from the user - (optional) get a
participants.json
data dictionary from the user - parse and store uploaded data in global store
- get a
- Categorization
- go through each column of the
participants.tsv
file and map to one of 5 categories - categories: ['subjectID', 'Age', 'Sex', 'Diagnosis', 'Assessment tool']
- only 'subjectID' is mandatory (according to BIDS)
- go through each column of the
- Annotation
- for each category that was mapped in the previous step (other than 'subjectID'):
- provide additional mappings of the values.
- e.g. for "age", bring all age values into a common format
- e.g. for "Diagnosis", map all values into the SNOMED-CT format
- Download
- export the annotated data to the user