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Fix use of mpirun as root #252

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merged 41 commits into from
Dec 12, 2024
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29adbb2
Merge build and deploy to fix deploy problems
steffengraber Feb 9, 2024
3d52979
Merge remote-tracking branch 'upstream/master'
steffengraber Mar 7, 2024
e1cfa85
Merge remote-tracking branch 'upstream/master'
steffengraber Mar 8, 2024
d63f2f4
Merge remote-tracking branch 'upstream/master'
steffengraber Mar 26, 2024
ab7e910
Merge remote-tracking branch 'upstream/master'
steffengraber Apr 4, 2024
1adf82e
Add nest-server requirements
steffengraber Apr 4, 2024
5301617
Fix nest-desktop and compose file
steffengraber Apr 4, 2024
c384fb0
Add v3.7
steffengraber Apr 12, 2024
93b1397
Merge branch 'fix-nest-server'
steffengraber Apr 12, 2024
a52208a
Merge remote-tracking branch 'upstream/master'
steffengraber Apr 15, 2024
d01ede0
Remove test
steffengraber Apr 19, 2024
fa70bbb
Add v3.7 to readme
steffengraber Apr 19, 2024
fe3ca17
Merge remote-tracking branch 'upstream/master'
steffengraber May 15, 2024
52d7575
Fix nestml version and add pygsl
steffengraber May 15, 2024
5fd6274
Merge remote-tracking branch 'upstream/master'
steffengraber Jun 17, 2024
685f670
Merge remote-tracking branch 'upstream/master'
steffengraber Jun 20, 2024
d016e77
Merge remote-tracking branch 'upstream/master'
steffengraber Jul 17, 2024
b2ee7da
Install nestml fix for nest verssion
steffengraber Jul 17, 2024
00d1176
Merge remote-tracking branch 'upstream/master'
steffengraber Jul 18, 2024
28e1391
Fix merging errors
steffengraber Jul 18, 2024
de16dfe
Merge remote-tracking branch 'upstream/master'
steffengraber Jul 22, 2024
4527fa9
Merge remote-tracking branch 'upstream/master'
steffengraber Jul 22, 2024
c567942
Merge remote-tracking branch 'upstream/master'
steffengraber Jul 22, 2024
1174227
Merge remote-tracking branch 'upstream/master'
steffengraber Aug 1, 2024
e99a8a3
Deactivate build of 3.7 and 2.20.2 in CI
steffengraber Aug 1, 2024
fe8fe76
Add rc2
steffengraber Aug 1, 2024
9f9e145
NEW Version 3.8
steffengraber Aug 5, 2024
52db54a
Merge branch 'master' into master
steffengraber Aug 6, 2024
64354c4
Merge remote-tracking branch 'upstream/master'
steffengraber Aug 6, 2024
2f4ec0f
Merge remote-tracking branch 'upstream/master'
steffengraber Aug 22, 2024
5fcb523
Merge remote-tracking branch 'upstream/master'
steffengraber Sep 26, 2024
2b2fef5
Merge remote-tracking branch 'upstream/master'
steffengraber Oct 1, 2024
725053a
Merge remote-tracking branch 'refs/remotes/origin/master'
steffengraber Oct 1, 2024
488a45a
Fix the mermaid installation with a patch and fix some doubles
steffengraber Oct 17, 2024
91aae25
Fix numpy installation
steffengraber Oct 24, 2024
4af0fdc
Merge remote-tracking branch 'upstream/master'
steffengraber Oct 24, 2024
cb87371
Merge branch 'fix-sphinx'
steffengraber Oct 24, 2024
f525c1e
Add NESTML v8.0.0rc3
steffengraber Nov 27, 2024
807b178
Merge remote-tracking branch 'upstream/master'
steffengraber Dec 12, 2024
d71e0c7
Fix use mpirun as root in container
steffengraber Dec 12, 2024
4eba715
Fixuse mpirun as root
steffengraber Dec 12, 2024
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4 changes: 3 additions & 1 deletion src/3.8/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,9 @@ ARG CXX_FLAGS="-pedantic -Wextra -Wno-unknown-pragmas -D_GLIBCXX_ASSERTIONS"
ENV TERM=xterm \
TZ=Europe/Berlin \
DEBIAN_FRONTEND=noninteractive \
PATH=/root/.local/bin:${PATH}
PATH=/root/.local/bin:${PATH} \
OMPI_ALLOW_RUN_AS_ROOT=1 \
OMPI_ALLOW_RUN_AS_ROOT_CONFIRM=1

RUN apt-get update && apt-get install -y --no-install-recommends \
automake \
Expand Down
4 changes: 3 additions & 1 deletion src/dev/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,9 @@ ARG CXX_FLAGS="-pedantic -Wextra -Wno-unknown-pragmas -D_GLIBCXX_ASSERTIONS"
ENV TERM=xterm \
TZ=Europe/Berlin \
DEBIAN_FRONTEND=noninteractive \
PATH=/root/.local/bin:${PATH}
PATH=/root/.local/bin:${PATH} \
OMPI_ALLOW_RUN_AS_ROOT=1 \
OMPI_ALLOW_RUN_AS_ROOT_CONFIRM=1

RUN apt-get update && apt-get install -y --no-install-recommends \
automake \
Expand Down
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