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Example of TArgeted Motion Estimation and Reduction (TAMER) for motion correction in MRI

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Name		Name	Last commit message	Last commit date
Latest commit History 9 Commits
funcs_tamer		funcs_tamer
tamer_data		tamer_data
LICENSE		LICENSE
README.txt		README.txt
tamer_recon.m		tamer_recon.m

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README.txt

This is example code for Figure 8 of "TArgeted Motion Estimation and 
Reduction (TAMER): Data Consistency Based Motion Mitigation for MRI using a
Reduced Model Joint Optimization" by Melissa W. Haskell, Stephen F. 
Cauley, and Lawrence L. Wald

written by Melissa W. Haskell and Stephen F. Cauley

Last Updated: Nov 17, 2017

Folder contents:

tamer_recon.m 
    -main script to run the TAMER demo

/funcs_tamer
    -folder containing all relevant functions, included minimization 
     objective function, and target voxel selection function

/tamer_data
    -folder containing raw data to run this example, can choose between
     two different slices to reconstruct

Additional Notes:

-This was tested on MATLAB 2016a. Earlier versions that use "optimset" 
instead of "optimoptions" to set the minimization function will not run.