-
Notifications
You must be signed in to change notification settings - Fork 5
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
ProtGraph Merge #72
Closed
Closed
ProtGraph Merge #72
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Member
Luxxii
commented
Jul 10, 2024
•
edited
Loading
edited
- Minor Bug-Fixes due to changes in some dependencies (and changes of TXT-format and its programmatic representation)
- Extendend PTM Annotation possibilites and also added new Edge Cases
- Rewritten the FASTA compacter to be more memory efficient
…ailable in those features
…t to be added in the graph, the features to be used for counting. This allows us for further tools to use this information to not only limit on variants, but by arbitrary features
…on variable or fixed modifications
…s#49), removed if-main in script
fixes mpc-bioinformatics#67 ProtGraph can now add multiple PTMs (even on same AminoAcids) in various combinations into ProteinGraphs. It can be set for N/C-Terminal Peptide/Protein PTMs as well as on single aminoacids. Documnetation is still missing
…ated correctly in the FASTA-Header
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.