Merge pull request #21 from monarch-initiative/better-cats

Get more of those Biolink categories in there
monarch-initiative · Oct 6, 2022 · 61afa3b · 61afa3b
2 parents 24a85c4 + 85233a0
commit 61afa3b
Showing 1 changed file with 1 addition and 10 deletions.
diff --git a/src/sparql/bl-categories.ru b/src/sparql/bl-categories.ru
@@ -13,20 +13,11 @@ INSERT {
 }
 WHERE {
   {
-    ?biolink_category skos:exactMatch ?entity_to_type .
+    ?biolink_category (skos:exactMatch|skos:narrowMatch)+ ?entity_to_type .
     ?subject (rdf:type|rdfs:subClassOf|owl:equivalentClass|^owl:equivalentClass|owl:sameAs|^owl:sameAs)* ?entity_to_type .
     FILTER(STRSTARTS(str(?biolink_category),"https://w3id.org/biolink/vocab/"))
     FILTER(isIRI(?subject))
     FILTER(isIRI(?biolink_category))
     FILTER(isIRI(?entity_to_type))
   }
-  UNION
-  {
-    ?biolink_category skos:narrowMatch ?entity_to_type .
-    ?subject rdfs:subClassOf+ ?entity_to_type .
-    FILTER(STRSTARTS(str(?biolink_category),"https://w3id.org/biolink/vocab/"))
-    FILTER(isIRI(?subject))
-    FILTER(isIRI(?biolink_category))
-    FILTER(isIRI(?entity_to_type))
-  }
 }