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Merge MONDO:0020175 and MONDO:0021313 #8365

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Nov 13, 2024
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Merge MONDO:0020175 and MONDO:0021313 #8365

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39 changes: 18 additions & 21 deletions src/ontology/mondo-edit.obo
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Original file line number Diff line number Diff line change
Expand Up @@ -144073,7 +144073,7 @@ is_a: MONDO:0019755 ! developmental defect during embryogenesis
is_a: MONDO:0021147 ! disorder of development or morphogenesis
is_a: MONDO:0042983 {source="NCIT:C2892", source="Wikipedia:Phakomatosis"} ! neurocutaneous syndrome
relationship: curated_content_resource https://search.clinicalgenome.org/kb/conditions/MONDO:0007187 {source="MONDO:CLINGEN"}
relationship: disease_has_feature MONDO:0020175 {source="Orphanet:377"} ! malignant tumor of palpebral epidermis
relationship: disease_has_feature MONDO:0021313 {source="Orphanet:377"} ! eyelid cancer
relationship: has_characteristic HP:0000006 {source="MONDO:HPOA", source="OMIM:109400", source="Orphanet:377"} ! Autosomal dominant inheritance
relationship: has_characteristic MONDO:0021152 {source="OMIMPS:109400"} ! inherited

Expand Down Expand Up @@ -234151,7 +234151,7 @@ xref: UMLS:C0346104 {source="MEDGEN:87539", source="MONDO:equivalentTo", source=
is_a: MONDO:0005093 {source="MONDO:0019546-obsoleted"} ! skin disorder
relationship: excluded_subClassOf MONDO:0015950 {source="Orphanet:113", source="https://orcid.org/0000-0001-5208-3432"} ! obsolete inherited skin tumor
relationship: excluded_subClassOf MONDO:0019300 {source="Orphanet:113", source="https://orcid.org/0000-0001-5208-3432"} ! obsolete rare skin tumor or hamartoma
relationship: excluded_subClassOf MONDO:0020175 {source="Orphanet:113", source="https://orcid.org/0000-0001-5208-3432"} ! malignant tumor of palpebral epidermis
relationship: excluded_subClassOf MONDO:0020175 {source="Orphanet:113", source="https://orcid.org/0000-0001-5208-3432"} ! obsolete malignant tumor of palpebral epidermis
relationship: excluded_subClassOf MONDO:0020188 {source="Orphanet:113", source="https://orcid.org/0000-0001-5208-3432"} ! obsolete congenital absence of the eyebrow/eyelashes
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/4521" xsd:anyURI

Expand Down Expand Up @@ -267781,7 +267781,7 @@ synonym: "Hurthle cell carcinoma of thyroid gland" EXACT [NCIT:C4946]
synonym: "Hurthle cell thyroid cancer" RELATED [GARD:0009428]
synonym: "Hurthle cell thyroid gland carcinoma" EXACT [NCIT:C4946]
synonym: "Hurthle cell thyroid neoplasia" RELATED [OMIM:607464]
synonym: "oncocytic carcinoma of the thyroid" EXACT [NCIT:C4946, DOID:8161]
synonym: "oncocytic carcinoma of the thyroid" EXACT [DOID:8161, NCIT:C4946]
synonym: "oncocytic carcinoma of thyroid" EXACT [NCIT:C4946]
synonym: "thyroid cancer, follicular, Hurthle cell type" RELATED [GARD:0009428]
synonym: "thyroid cancer, Hurthle cell" RELATED [GARD:0009428]
Expand Down Expand Up @@ -454714,22 +454714,11 @@ is_obsolete: true

[Term]
id: MONDO:0020175
name: malignant tumor of palpebral epidermis
def: "A cancer that involves the skin of eyelid." [MONDO:patterns/location]
comment: Reason of obsoletion: duplicate. This will be merged with MONDO:0021313 eyelid cancer
subset: disease_grouping
subset: obsoletion_candidate
synonym: "cancer of skin of eyelid" EXACT [MONDO:patterns/cancer]
synonym: "malignant neoplasm of skin of eyelid" EXACT [MONDO:patterns/cancer]
synonym: "malignant skin of eyelid neoplasm" EXACT [MONDO:patterns/cancer]
synonym: "skin of eyelid cancer" EXACT [MONDO:patterns/location]
xref: Orphanet:98584 {source="MONDO:equivalentObsolete"}
xref: SCTID:423425006 {source="MONDO:equivalentTo"}
is_a: MONDO:0020172 {source="MONDO:Redundant", source="Orphanet:98584"} ! palpebral epidermal tumor
intersection_of: MONDO:0004992 ! cancer
intersection_of: disease_has_location UBERON:0001457 ! skin of eyelid
name: obsolete malignant tumor of palpebral epidermis
property_value: IAO:0000231 MONDO:TermsMerged
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/7698" xsd:anyURI
property_value: IAO:0006012 "2024-08-01" xsd:string
is_obsolete: true
replaced_by: MONDO:0021313

[Term]
id: MONDO:0020176
Expand Down Expand Up @@ -473113,27 +473102,35 @@ intersection_of: disease_has_location UBERON:0001235 ! adrenal cortex
id: MONDO:0021313
name: eyelid cancer
def: "A cancer that involves the eyelid." [MONDO:patterns/location]
subset: disease_grouping
subset: otar {source="MONDO:OTAR"}
synonym: "cancer of eyelid" EXACT [MONDO:patterns/cancer]
synonym: "cancer of skin of eyelid" EXACT [MONDO:patterns/cancer]
synonym: "eyelid cancer" EXACT [MONDO:patterns/location]
synonym: "malignant eyelid neoplasm" EXACT [MONDO:patterns/cancer, NCIT:C6786]
synonym: "malignant eyelid tumor" EXACT [NCIT:C6786]
synonym: "malignant eyelid tumour" EXACT OMO:0003005 []
synonym: "malignant neoplasm of eyelid" EXACT [MONDO:patterns/cancer, NCIT:C6786]
synonym: "malignant neoplasm of skin of eyelid" EXACT [MONDO:patterns/cancer]
synonym: "malignant neoplasm of the eyelid" EXACT [NCIT:C6786]
synonym: "malignant skin of eyelid neoplasm" EXACT [MONDO:patterns/cancer]
synonym: "malignant tumor of eyelid" EXACT [NCIT:C6786]
synonym: "malignant tumor of the eyelid" EXACT [NCIT:C6786]
synonym: "malignant tumour of eyelid" EXACT OMO:0003005 []
synonym: "malignant tumor of palpebral epidermis" EXACT [MONDO:0020175]
synonym: "malignant tumour of the eyelid" EXACT OMO:0003005 []
synonym: "skin of eyelid cancer" EXACT [MONDO:patterns/location]
xref: ICD9:173.1 {source="MONDO:relatedTo", source="MONDO:i2s"}
xref: MEDGEN:501131 {source="MONDO:equivalentTo", source="MONDO:MEDGEN"}
xref: NCIT:C6786 {source="MONDO:equivalentTo"}
xref: SCTID:231829006 {source="MONDO:equivalentTo"}
xref: Orphanet:98584 {source="MONDO:equivalentObsolete"}
xref: SCTID:231829006 {source="MONDO:equivalentTo", source="MONDO:preferredExternal"}
xref: SCTID:423425006 {source="MONDO:equivalentTo"}
xref: UMLS:C1828015 {source="MONDO:equivalentTo", source="MONDO:MEDGEN", source="MEDGEN:501131"}
is_a: MONDO:0002235 {source="MONDO:Redundant", source="NCIT:C6786"} ! eyelid neoplasm
is_a: MONDO:0002236 {source="MONDO:Redundant", source="NCIT:C6786"} ! ocular cancer
is_a: MONDO:0020172 {source="MONDO:Redundant", source="Orphanet:98584"} ! palpebral epidermal tumor
intersection_of: MONDO:0004992 ! cancer
intersection_of: disease_has_location UBERON:0001711 ! eyelid
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/7698" xsd:anyURI

[Term]
id: MONDO:0021315
Expand Down
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