Update DOSDP template and SPARQL qc documentation (#8333)

Co-authored-by: matentzn <[email protected]>
monarch-initiative · Nov 15, 2024 · 4995da4 · 4995da4
1 parent 4f562f0
commit 4995da4
Show file tree

Hide file tree

Showing 4 changed files with 4 additions and 4 deletions.
diff --git a/docs/editors-guide/patterns/index.md b/docs/editors-guide/patterns/index.md
@@ -92,8 +92,8 @@
 | [severe](severe/) | Pattern for describing the severity of a disease, in this case, a severe form of the disease. Here severe means having a high degree of severity. This may correspond with specific genetic mutations (or homozygous or heterozygous forms).<br/>Examples: [severe ichthyosis vulgaris](http://purl.obolibrary.org/obo/MONDO_0100475) | 
 | [small cell carcinoma disease has location X](small_cell_carcinoma/) | This is auto-generated. Add your description here<br/>Examples: [cervical small cell carcinoma](http://purl.obolibrary.org/obo/MONDO_0006142), [pancreatic small cell neuroendocrine carcinoma](http://purl.obolibrary.org/obo/MONDO_0006348), [ureter small cell carcinoma](http://purl.obolibrary.org/obo/MONDO_0006482) (16 total) | 
 | [specific_infectious_disease_by_location](specific_infectious_disease_by_location/) | <br/>TODO | 
-| [specific_inflammatory_disease_by_site](specific_infectious_disease_by_agent/) | <br/>as for inflammatory_disease_by_site, but refining a specific disease | 
 | [specific_inflammatory_disease_by_site](specific_inflammatory_disease_by_site/) | <br/>as for inflammatory_disease_by_site, but refining a specific disease | 
+| [specific_inflammatory_disease_by_site](specific_infectious_disease_by_agent/) | <br/>as for inflammatory_disease_by_site, but refining a specific disease | 
 | [squamous cell carcinoma disease has location X](squamous_cell_carcinoma/) | This is auto-generated. Add your description here<br/>Examples: [cervical squamous cell carcinoma](http://purl.obolibrary.org/obo/MONDO_0006143), [skin squamous cell carcinoma](http://purl.obolibrary.org/obo/MONDO_0002529), [ureter squamous cell carcinoma](http://purl.obolibrary.org/obo/MONDO_0003502) (63 total) | 
 | [substance_abuse](substance_abuse/) | A substance abuse that specifies a specific environmental stimulus such as alcohol, cocaine, etc. Examples: [alcohol abuse](http://purl.obolibrary.org/obo/MONDO_0002046), [cocaine abuse](http://purl.obolibrary.org/obo/MONDO_0004456) | 
 | [susceptibility_by_gene](susceptibility_by_gene/) | This pattern should be used for terms in which a gene dysfunction causes a predisposition or susceptibility towards developing a specific disease. This pattern is a sub-pattern of [inherited_susceptibility.yaml](https://github.com/monarch-initiative/mondo/blob/master/src/patterns/dosdp-patterns/inherited_susceptibility.yaml)<br/>Examples - [autism, susceptibility to, X-linked 5](http://purl.obolibrary.org/obo/MONDO_0010449), [bulimia nervosa, susceptibility to, 2](http://purl.obolibrary.org/obo/MONDO_0012461), [nephrolithiasis susceptibility caused by SLC26A1](http://purl.obolibrary.org/obo/MONDO_0020722)' | 

diff --git a/src/patterns/pattern-merged.owl b/src/patterns/pattern-merged.owl
@@ -10,7 +10,7 @@
      xmlns:terms="http://purl.org/dc/terms/"
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/mondo/mondo-pattern.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/mondo/releases/2024-10-15/mondo-pattern.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/mondo/releases/2024-11-12/mondo-pattern.owl"/>
     </owl:Ontology>
 
 

diff --git a/src/patterns/pattern-with-imports.owl b/src/patterns/pattern-with-imports.owl
@@ -10,7 +10,7 @@
      xmlns:terms="http://purl.org/dc/terms/"
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/mondo/mondo-pattern.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/mondo/releases/2024-10-15/mondo-pattern.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/mondo/releases/2024-11-12/mondo-pattern.owl"/>
     </owl:Ontology>
 
 

diff --git a/src/patterns/pattern.owl b/src/patterns/pattern.owl
@@ -10,7 +10,7 @@
      xmlns:terms="http://purl.org/dc/terms/"
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/mondo/patterns/pattern.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/mondo/releases/2024-10-15/mondo-pattern.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/mondo/releases/2024-11-12/mondo-pattern.owl"/>
     </owl:Ontology>