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2 changes: 1 addition & 1 deletion dev/.buildinfo
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# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
config: 44192efb565aa49c3b07ca116dc177a5
config: ff6e873c3173e6a9229654c8de78e421
tags: 645f666f9bcd5a90fca523b33c5a78b7
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2 changes: 1 addition & 1 deletion dev/_modules/index.html
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Expand Up @@ -560,7 +560,7 @@ <h1>All modules for which code is available</h1>
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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2 changes: 1 addition & 1 deletion dev/_modules/mne_bids/copyfiles.html
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Expand Up @@ -1197,7 +1197,7 @@ <h1>Source code for mne_bids.copyfiles</h1><div class="highlight"><pre>
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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2 changes: 1 addition & 1 deletion dev/_modules/mne_bids/dig.html
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Expand Up @@ -1345,7 +1345,7 @@ <h1>Source code for mne_bids.dig</h1><div class="highlight"><pre>
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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2 changes: 1 addition & 1 deletion dev/_modules/mne_bids/inspect.html
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Expand Up @@ -1008,7 +1008,7 @@ <h1>Source code for mne_bids.inspect</h1><div class="highlight"><pre>
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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2 changes: 1 addition & 1 deletion dev/_modules/mne_bids/path.html
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Expand Up @@ -3046,7 +3046,7 @@ <h1>Source code for mne_bids.path</h1><div class="highlight"><pre>
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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2 changes: 1 addition & 1 deletion dev/_modules/mne_bids/read.html
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Expand Up @@ -1707,7 +1707,7 @@ <h1>Source code for mne_bids.read</h1><div class="highlight"><pre>
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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2 changes: 1 addition & 1 deletion dev/_modules/mne_bids/report/_report.html
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Expand Up @@ -1091,7 +1091,7 @@ <h1>Source code for mne_bids.report._report</h1><div class="highlight"><pre>
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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2 changes: 1 addition & 1 deletion dev/_modules/mne_bids/sidecar_updates.html
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Expand Up @@ -942,7 +942,7 @@ <h1>Source code for mne_bids.sidecar_updates</h1><div class="highlight"><pre>
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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2 changes: 1 addition & 1 deletion dev/_modules/mne_bids/stats.html
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Expand Up @@ -677,7 +677,7 @@ <h1>Source code for mne_bids.stats</h1><div class="highlight"><pre>
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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2 changes: 1 addition & 1 deletion dev/_modules/mne_bids/utils.html
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Expand Up @@ -1095,7 +1095,7 @@ <h1>Source code for mne_bids.utils</h1><div class="highlight"><pre>
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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2 changes: 1 addition & 1 deletion dev/_modules/mne_bids/write.html
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Expand Up @@ -3678,7 +3678,7 @@ <h1>Source code for mne_bids.write</h1><div class="highlight"><pre>
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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2 changes: 1 addition & 1 deletion dev/api.html
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Expand Up @@ -770,7 +770,7 @@ <h2>mne_bids.copyfiles<a class="headerlink" href="#mne-bids-copyfiles" title="Pe
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
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</p>
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2 changes: 1 addition & 1 deletion dev/authors.html
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Expand Up @@ -568,7 +568,7 @@
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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64 changes: 32 additions & 32 deletions dev/auto_examples/anonymize_dataset.html
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Expand Up @@ -672,18 +672,18 @@ <h2>Basic anonymization<a class="headerlink" href="#basic-anonymization" title="
Input: /home/circleci/mne_data/MNE-sample-data-bids
Output: /home/circleci/mne_data/MNE-sample-data-bids-anon

Shifting recording dates by 29183 days (80.0 years).
Shifting recording dates by 35943 days (98.5 years).
Using the following subject ID anonymization mapping:

sub-ABC123 → sub-1
sub-emptyroom → sub-emptyroom


0%| | Anonymizing : 0/5 [00:00&lt;?, ?it/s]
20%|██ | Anonymizing : 1/5 [00:00&lt;00:01, 3.59it/s]
40%|████ | Anonymizing : 2/5 [00:02&lt;00:03, 1.22s/it]
60%|██████ | Anonymizing : 3/5 [00:03&lt;00:02, 1.04s/it]
100%|██████████| Anonymizing : 5/5 [00:03&lt;00:00, 1.61it/s]
20%|██ | Anonymizing : 1/5 [00:00&lt;00:01, 3.02it/s]
40%|████ | Anonymizing : 2/5 [00:02&lt;00:03, 1.29s/it]
60%|██████ | Anonymizing : 3/5 [00:03&lt;00:02, 1.10s/it]
100%|██████████| Anonymizing : 5/5 [00:03&lt;00:00, 1.52it/s]
</pre></div>
</div>
<p>That’s it! Let’s have a look at directory structure of the anonymized
Expand Down Expand Up @@ -711,12 +711,12 @@ <h2>Basic anonymization<a class="headerlink" href="#basic-anonymization" title="
|--------- sub-1_task-audiovisual_meg.fif
|--------- sub-1_task-audiovisual_meg.json
|--- sub-emptyroom/
|------ ses-19230112/
|--------- sub-emptyroom_ses-19230112_scans.tsv
|------ ses-19040710/
|--------- sub-emptyroom_ses-19040710_scans.tsv
|--------- meg/
|------------ sub-emptyroom_ses-19230112_task-noise_channels.tsv
|------------ sub-emptyroom_ses-19230112_task-noise_meg.fif
|------------ sub-emptyroom_ses-19230112_task-noise_meg.json
|------------ sub-emptyroom_ses-19040710_task-noise_channels.tsv
|------------ sub-emptyroom_ses-19040710_task-noise_meg.fif
|------------ sub-emptyroom_ses-19040710_task-noise_meg.json
</pre></div>
</div>
<p>You can see that the subject ID was changed to a number (in this case, the
Expand Down Expand Up @@ -754,8 +754,8 @@ <h2>Limiting to specific data types<a class="headerlink" href="#limiting-to-spec


0%| | Anonymizing : 0/1 [00:00&lt;?, ?it/s]
100%|██████████| Anonymizing : 1/1 [00:02&lt;00:00, 2.12s/it]
100%|██████████| Anonymizing : 1/1 [00:02&lt;00:00, 2.12s/it]
100%|██████████| Anonymizing : 1/1 [00:02&lt;00:00, 2.19s/it]
100%|██████████| Anonymizing : 1/1 [00:02&lt;00:00, 2.19s/it]
|MNE-sample-data-bids-anon/
|--- README
|--- dataset_description.json
Expand Down Expand Up @@ -797,9 +797,9 @@ <h2>Specifying time shift<a class="headerlink" href="#specifying-time-shift" tit


0%| | Anonymizing : 0/4 [00:00&lt;?, ?it/s]
25%|██▌ | Anonymizing : 1/4 [00:00&lt;00:00, 3.24it/s]
50%|█████ | Anonymizing : 2/4 [00:01&lt;00:01, 1.96it/s]
100%|██████████| Anonymizing : 4/4 [00:01&lt;00:00, 3.93it/s]
25%|██▌ | Anonymizing : 1/4 [00:00&lt;00:01, 2.87it/s]
50%|█████ | Anonymizing : 2/4 [00:01&lt;00:01, 1.82it/s]
100%|██████████| Anonymizing : 4/4 [00:01&lt;00:00, 3.64it/s]
|sub-emptyroom/
|--- ses-20021126/
|------ sub-emptyroom_ses-20021126_scans.tsv
Expand Down Expand Up @@ -837,17 +837,17 @@ <h2>Specifying subject IDs<a class="headerlink" href="#specifying-subject-ids" t
Input: /home/circleci/mne_data/MNE-sample-data-bids
Output: /home/circleci/mne_data/MNE-sample-data-bids-anon

Shifting recording dates by 35928 days (98.4 years).
Shifting recording dates by 35190 days (96.4 years).
Using the following subject ID anonymization mapping:

sub-ABC123 → sub-anonymous
sub-emptyroom → sub-emptyroom


0%| | Anonymizing : 0/4 [00:00&lt;?, ?it/s]
25%|██▌ | Anonymizing : 1/4 [00:00&lt;00:00, 3.65it/s]
50%|█████ | Anonymizing : 2/4 [00:00&lt;00:00, 2.05it/s]
100%|██████████| Anonymizing : 4/4 [00:00&lt;00:00, 4.11it/s]
25%|██▌ | Anonymizing : 1/4 [00:00&lt;00:01, 2.94it/s]
50%|█████ | Anonymizing : 2/4 [00:01&lt;00:01, 1.82it/s]
100%|██████████| Anonymizing : 4/4 [00:01&lt;00:00, 3.65it/s]
|MNE-sample-data-bids-anon/
|--- README
|--- dataset_description.json
Expand All @@ -865,12 +865,12 @@ <h2>Specifying subject IDs<a class="headerlink" href="#specifying-subject-ids" t
|--------- sub-anonymous_task-audiovisual_meg.fif
|--------- sub-anonymous_task-audiovisual_meg.json
|--- sub-emptyroom/
|------ ses-19040725/
|--------- sub-emptyroom_ses-19040725_scans.tsv
|------ ses-19060802/
|--------- sub-emptyroom_ses-19060802_scans.tsv
|--------- meg/
|------------ sub-emptyroom_ses-19040725_task-noise_channels.tsv
|------------ sub-emptyroom_ses-19040725_task-noise_meg.fif
|------------ sub-emptyroom_ses-19040725_task-noise_meg.json
|------------ sub-emptyroom_ses-19060802_task-noise_channels.tsv
|------------ sub-emptyroom_ses-19060802_task-noise_meg.fif
|------------ sub-emptyroom_ses-19060802_task-noise_meg.json
</pre></div>
</div>
</section>
Expand Down Expand Up @@ -927,9 +927,9 @@ <h2>Reproducibility<a class="headerlink" href="#reproducibility" title="Permalin


0%| | Anonymizing : 0/4 [00:00&lt;?, ?it/s]
25%|██▌ | Anonymizing : 1/4 [00:00&lt;00:00, 3.62it/s]
50%|█████ | Anonymizing : 2/4 [00:00&lt;00:00, 2.04it/s]
100%|██████████| Anonymizing : 4/4 [00:00&lt;00:00, 4.10it/s]
25%|██▌ | Anonymizing : 1/4 [00:00&lt;00:01, 2.88it/s]
50%|█████ | Anonymizing : 2/4 [00:01&lt;00:01, 1.76it/s]
100%|██████████| Anonymizing : 4/4 [00:01&lt;00:00, 3.54it/s]
|MNE-sample-data-bids-anon/
|--- README
|--- dataset_description.json
Expand Down Expand Up @@ -972,9 +972,9 @@ <h2>Reproducibility<a class="headerlink" href="#reproducibility" title="Permalin


0%| | Anonymizing : 0/4 [00:00&lt;?, ?it/s]
25%|██▌ | Anonymizing : 1/4 [00:00&lt;00:00, 3.56it/s]
50%|█████ | Anonymizing : 2/4 [00:00&lt;00:00, 2.04it/s]
100%|██████████| Anonymizing : 4/4 [00:00&lt;00:00, 4.09it/s]
25%|██▌ | Anonymizing : 1/4 [00:00&lt;00:01, 2.93it/s]
50%|█████ | Anonymizing : 2/4 [00:01&lt;00:01, 1.81it/s]
100%|██████████| Anonymizing : 4/4 [00:01&lt;00:00, 3.64it/s]
|MNE-sample-data-bids-anon/
|--- README
|--- dataset_description.json
Expand All @@ -1000,7 +1000,7 @@ <h2>Reproducibility<a class="headerlink" href="#reproducibility" title="Permalin
|------------ sub-emptyroom_ses-19221211_task-noise_meg.json
</pre></div>
</div>
<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 10.825 seconds)</p>
<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 11.716 seconds)</p>
<div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-anonymize-dataset-py">
<div class="binder-badge docutils container">
<a class="reference external image-reference" href="https://mybinder.org/v2/gh/mne-tools/mne-bids/gh-pages?filepath=dev/notebooks/auto_examples/anonymize_dataset.ipynb"><img alt="Launch binder" src="../_images/binder_badge_logo.svg" width="150px" /></a>
Expand Down Expand Up @@ -1091,7 +1091,7 @@ <h2>Reproducibility<a class="headerlink" href="#reproducibility" title="Permalin
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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2 changes: 1 addition & 1 deletion dev/auto_examples/bidspath.html
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<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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4 changes: 2 additions & 2 deletions dev/auto_examples/convert_eeg_to_bids.html
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Expand Up @@ -1129,7 +1129,7 @@ <h2>Cite mne-bids<a class="headerlink" href="#cite-mne-bids" title="Permalink to
command line tool:</p>
<p>Web version: <a class="reference external" href="https://bids-standard.github.io/bids-validator/">https://bids-standard.github.io/bids-validator/</a></p>
<p>Command line tool: <a class="reference external" href="https://www.npmjs.com/package/bids-validator">https://www.npmjs.com/package/bids-validator</a></p>
<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 0.605 seconds)</p>
<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 0.620 seconds)</p>
<div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-convert-eeg-to-bids-py">
<div class="binder-badge docutils container">
<a class="reference external image-reference" href="https://mybinder.org/v2/gh/mne-tools/mne-bids/gh-pages?filepath=dev/notebooks/auto_examples/convert_eeg_to_bids.ipynb"><img alt="Launch binder" src="../_images/binder_badge_logo.svg" width="150px" /></a>
Expand Down Expand Up @@ -1218,7 +1218,7 @@ <h2>Cite mne-bids<a class="headerlink" href="#cite-mne-bids" title="Permalink to
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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4 changes: 2 additions & 2 deletions dev/auto_examples/convert_empty_room.html
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Expand Up @@ -871,7 +871,7 @@
&lt;Raw | sub-emptyroom_ses-20021204_task-noise_meg.fif, 315 x 66068 (110.0 s), ~354 kB, data not loaded&gt;
</pre></div>
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<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 1.800 seconds)</p>
<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 2.125 seconds)</p>
<div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-convert-empty-room-py">
<div class="binder-badge docutils container">
<a class="reference external image-reference" href="https://mybinder.org/v2/gh/mne-tools/mne-bids/gh-pages?filepath=dev/notebooks/auto_examples/convert_empty_room.ipynb"><img alt="Launch binder" src="../_images/binder_badge_logo.svg" width="150px" /></a>
Expand Down Expand Up @@ -943,7 +943,7 @@
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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4 changes: 2 additions & 2 deletions dev/auto_examples/convert_group_studies.html
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Expand Up @@ -953,7 +953,7 @@
0.0 were removed from analysis).
</pre></div>
</div>
<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 2.136 seconds)</p>
<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 2.199 seconds)</p>
<div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-convert-group-studies-py">
<div class="binder-badge docutils container">
<a class="reference external image-reference" href="https://mybinder.org/v2/gh/mne-tools/mne-bids/gh-pages?filepath=dev/notebooks/auto_examples/convert_group_studies.ipynb"><img alt="Launch binder" src="../_images/binder_badge_logo.svg" width="150px" /></a>
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<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-30.
<br/>

</p>
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4 changes: 2 additions & 2 deletions dev/auto_examples/convert_ieeg_to_bids.html
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Expand Up @@ -1489,7 +1489,7 @@ <h2>Step 5: Store coordinates in a template space<a class="headerlink" href="#st
recommend, if at all possible, saving BIDS iEEG data in ACPC coordinate space
corresponding to the individual subject’s brain, not in a template
coordinate frame.</p>
<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 4.977 seconds)</p>
<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 5.237 seconds)</p>
<div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-convert-ieeg-to-bids-py">
<div class="binder-badge docutils container">
<a class="reference external image-reference" href="https://mybinder.org/v2/gh/mne-tools/mne-bids/gh-pages?filepath=dev/notebooks/auto_examples/convert_ieeg_to_bids.ipynb"><img alt="Launch binder" src="../_images/binder_badge_logo.svg" width="150px" /></a>
Expand Down Expand Up @@ -1581,7 +1581,7 @@ <h2>Step 5: Store coordinates in a template space<a class="headerlink" href="#st
<div class="footer-item">
<p class="copyright">

© Copyright 2017-2023, MNE Developers. Last updated on 2023-10-26.
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<br/>

</p>
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