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Theodore Zhao committed Dec 10, 2024
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![Example Predictions](assets/readmes/biomedparse_prediction_examples.png)

## News
- Dec. 5, 2024: The loading process of target_dist.json is optimized by automatic downloading from HuggingFace.
- Dec. 3, 2024: We added inference notebook examples in inference_example_RGB.ipynb and inference_example_NIFTI.ipynb
- Nov. 22, 2024: We added negative prediction p-value example in inference_example_DICOM.ipynb
- Nov. 18, 2024: BiomedParse is officially online in [*Nature Methods*](https://aka.ms/biomedparse-paper)!
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git clone https://github.com/microsoft/BiomedParse.git
```

[Notice] If inference_utils/target_dist.json is not cloned correctly, you can either use git lfs pull or change the content manually. We will refine the process in the future.
[Notice] If inference_utils/target_dist.json is not cloned correctly, it will be automatically loaded from HuggingFace when needed.

### Conda Environment Setup
#### Option 1: Directly build the conda environment
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