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usuyama committed Nov 19, 2024
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# **BiomedParse**
This is the official repository for "A foundation model for joint segmentation, detection and recognition of biomedical objects across nine modalities"

This repository hosts the code and resources for the paper **"A Foundation Model for Joint Segmentation, Detection, and Recognition of Biomedical Objects Across Nine Modalities"** (published in [*Nature Methods*](https://aka.ms/biomedparse-paper)).

[[`Paper`](https://aka.ms/biomedparse-paper)] [[`Demo`](https://microsoft.github.io/BiomedParse/)] [[`Model`](https://huggingface.co/microsoft/BiomedParse)] [[`Data`](https://huggingface.co/datasets/microsoft/BiomedParseData)] [[`BibTeX`](#Citation)]

**BiomedParse** is designed for comprehensive biomedical image analysis. It offers a unified approach to perform **segmentation**, **detection**, and **recognition** across diverse biomedical imaging modalities. By consolidating these tasks, BiomedParse provides an efficient and flexible tool tailored for researchers and practitioners, facilitating the interpretation and analysis of complex biomedical data.

![Example Predictions](assets/readmes/biomedparse_prediction_examples.png)

## Installation
```sh
git clone https://github.com/microsoft/BiomedParse.git
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