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Working Python acquisiton engine/backend + tests + RAM Storage for Python and Java #774

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merged 35 commits into from
Jun 15, 2024
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c1ddbf0
refeactors for ndtiff v3. Made RAM datasets work better
henrypinkard Jun 9, 2024
e5d1fa4
partial refactor of auto install functions + partial fixes for tests …
henrypinkard Jun 9, 2024
f64b0c1
fix remaining tests for acqengpy
henrypinkard Jun 11, 2024
3b9e812
bump ndtiff version
henrypinkard Jun 11, 2024
4228d9f
add tests for python backend Acquisition Engine and RAM storage; Upda…
henrypinkard Jun 13, 2024
a322c8f
bump version
henrypinkard Jun 13, 2024
ca7d46e
new package name
henrypinkard Jun 13, 2024
75c02bb
fix windows installer problems
henrypinkard Jun 13, 2024
b860b87
fix test configuration
henrypinkard Jun 13, 2024
63a9b38
remove extraneous print
henrypinkard Jun 13, 2024
621b1db
make it easier to run both python and java tests
henrypinkard Jun 13, 2024
1d44a94
remove print
henrypinkard Jun 13, 2024
8be9890
update requirements
henrypinkard Jun 13, 2024
3546fd3
merge
henrypinkard Jun 13, 2024
8080635
update pyjavaz dep as well
henrypinkard Jun 14, 2024
c348ebc
replace pyjavaz and better logging
henrypinkard Jun 14, 2024
491b00d
bump pm java version
henrypinkard Jun 14, 2024
e21472b
update NDTiff etc
henrypinkard Jun 14, 2024
b0d0a5f
manually update ndstorage version
henrypinkard Jun 14, 2024
bfc9aa9
revert back JAr name
henrypinkard Jun 14, 2024
bf9c28c
change back NDTiffStorage.jar name
henrypinkard Jun 14, 2024
4622764
bump ndtiff version
henrypinkard Jun 14, 2024
6607cd0
fix python image processor test
henrypinkard Jun 14, 2024
7ce58ad
better error handling (but still havent fixed test)
henrypinkard Jun 14, 2024
59ece1b
update to pyjavaz with fixed concurrency issues
henrypinkard Jun 14, 2024
8e14f13
increase memory
henrypinkard Jun 14, 2024
707e88e
small change to test
henrypinkard Jun 14, 2024
79fcc92
fix test and add better logging
henrypinkard Jun 14, 2024
b658269
logging
henrypinkard Jun 14, 2024
fc76a86
add explicit closing to fix test
henrypinkard Jun 14, 2024
c4f325d
close datasets
henrypinkard Jun 14, 2024
78eaee0
close datasets
henrypinkard Jun 14, 2024
75d70e8
possible test fix
henrypinkard Jun 14, 2024
f60d5e1
fix test
henrypinkard Jun 15, 2024
4714cb7
try restoring folder
henrypinkard Jun 15, 2024
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new package name
henrypinkard committed Jun 13, 2024
commit ca7d46ef93f84866cd1704f633cd622885cb4620
2 changes: 1 addition & 1 deletion pycromanager/acquisition/RAMStorage_java.py
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
from pyjavaz.wrappers import JavaObject
from ndtiff.ndstorage_base import NDStorageBase
from ndstorage.ndstorage_base import NDStorageBase

class NDRAMDatasetJava(NDStorageBase):
"""