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Bayesian coarse-graining of biomolecular structures

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cg

This Python package implements methods for Bayesian coarse-graining of biomolecular structures.

Installation

  • Local installation
python setup.py install --prefix=${HOME}
  • Global installation
sudo python setup.py install

Dependencies

Install with

pip install numpy scipy csb

Optional (used in only test and application scripts)

Install with

pip install matplotlib

Usage

Examples for running Bayesian coarse-graining on PDB structure can be found in the tests/ and scripts/ folder.

Execute the script cg_pdb.py.

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Bayesian coarse-graining of biomolecular structures

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