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8 Open 47 Closed
8 Open 47 Closed
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Issues list

How can I get the TElocal_indexer file TE index Questions about the TE GTF/pre-built index
#55 opened Jan 8, 2025 by LindaMax001
1
Mismatch between TElocal counts and BAM file reads question
#54 opened Dec 9, 2024 by ptranvan
13
How do I get the file that end in .locInd.locations TE index Questions about the TE GTF/pre-built index
#51 opened Jul 24, 2024 by LindaMax001
8
differential analysis TElocal regarding hundreds of samples question
#46 opened May 13, 2024 by frankligy
1
Some elements have more reads in unique mode vs multi mode input quirks Issue caused by quirks in input file
#44 opened May 1, 2024 by R-Najjar
6
TPM from the count matrix ? question
#43 opened Apr 26, 2024 by ptranvan
3
using TElocal to quantify locus TE expression enhancement New feature or request
#42 opened Apr 24, 2024 by mechealeth
2
Multimapper-aware bigwig tracks enhancement New feature or request
#30 opened May 31, 2023 by emattei
3
ProTip! no:milestone will show everything without a milestone.