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Adding script to build lobSTR reference bed from a fasta #71

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mgymrek wants to merge 4 commits into master from build-ref

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mgymrek commented Jan 17, 2016

Compiled from smaller scripts by @tfwillems and modified to adhere to required input format for lobSTR.
This can probably be cleaned up in the future

mgymrek added 2 commits

January 16, 2016 22:07


          adding script to generate reference bed

39b6adf


          editing script to generate lobstr ref bed

f768880

mgymrek added the in progress label

mgymrek added 2 commits

January 17, 2016 11:07


          adding option to use alt temp directory for making refd

ebc039b


          editing update messages for generating ref

1b9c764

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