minor readme edits

mfisher5 · Nov 2, 2020 · f2b140b · f2b140b
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diff --git a/.gitignore b/.gitignore
@@ -16,4 +16,4 @@ results/figures/fig1/*.png
 results/figures/fig1/*.ppt
 results/figures/fig1/*.pptx
 results/figures/fig1/*.pdf
-scripts/00_calculate_vessel_lengths.Rmd
+results/figures/TableS*
diff --git a/README.md b/README.md
@@ -61,7 +61,7 @@ To rerun the entire analysis, use the ordered .Rmd scripts in the **scripts** fo
 1. Fork and clone the repository.
 2. Copy raw fish ticket and vessel registration data downloaded from PacFIN into the **data/raw** directory. This folder is already included in the `.gitignore` file. 
 3. Run the scripts in order (details provided in the **scripts** directory README). We suggest that you check and update the `.gitignore` file after every script, to avoid accidentally publishing data containing confidential information.
-4. Use the scripts in the **scripts/figures** folder to recreate the figures in Fisher et al. (in revision).
+4. Use the scripts in the **scripts/figures** folder to recreate the figures and tables in Fisher et al. (in revision).
 
 <br>
 

diff --git a/scripts/README.md b/scripts/README.md
@@ -1,6 +1,6 @@
 ## Scripts
 
-Conduct the network analyses from Fisher et al. (in prep) using these RMarkdown scripts. They are ordered by step in the analysis, and will source functions from the `R` directory. Landings data are organized by fish ticket, and metiers identified within each port group. Where possible, `.html` files are provided as examples.
+Conduct the network analyses from Fisher et al. (in revision) using these RMarkdown scripts. They are ordered by step in the analysis, and will source functions from the `R` directory. Landings data are organized by fish ticket, and metiers identified within each port group. Where possible, `.html` files are provided as examples.
 
 
 (0. process the raw landings data from PacFIN)
@@ -28,3 +28,5 @@ Conduct the network analyses from Fisher et al. (in prep) using these RMarkdown
 
 
 Scripts in the **Figures** folder produce the figures used in the main text or the supplement.
+
+*Note that the code for the directed networks is specifically constructed to understand vessel participation and spillover centered around the Dungeness crab fishery. If you wish to apply this analysis to a different event / fishery, please contact the authors first!*