Fix reference to OBS_VERT_TYPES_ALT #7081
Workflow file for this run
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| name: CI | |
| on: | |
| pull_request: | |
| schedule: | |
| - cron: '0 12 1 * *' # 12:00, first day of the month | |
| jobs: | |
| lint-docs-package: | |
| runs-on: ubuntu-latest | |
| env: | |
| PYTHON: "3.10" | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ env.PYTHON }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ env.PYTHON }} | |
| - name: Python info | |
| run: | | |
| which python | |
| python --version | |
| - name: Install system packages | |
| run: | | |
| sudo apt update | |
| sudo apt install libudunits2-dev libgeos-dev libproj-dev proj-data proj-bin pandoc | |
| - name: Install Tox | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install tox | |
| - name: Check format and Run linter | |
| run: tox -e lint | |
| - name: Build docs | |
| run: tox -e docs | |
| - name: Build package | |
| run: tox -e build | |
| venv: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ['3.10', '3.11', '3.12'] | |
| experimental: [false] | |
| os: [ubuntu-22.04] | |
| #include: | |
| # - python-version: '3.13' | |
| # experimental: true | |
| # os: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: 'pip' # caching pip dependencies | |
| - name: Install system packages | |
| run: | | |
| sudo apt update | |
| sudo apt install libudunits2-dev libgeos-dev libproj-dev proj-data proj-bin | |
| - name: Tox environment | |
| run: | | |
| pip install --upgrade pip | |
| pip install tox | |
| tox -e py --notest | |
| - name: Run tests | |
| continue-on-error: ${{ matrix.experimental }} | |
| run: tox -e py -- --cov --no-cov-on-fail --cov-report xml | |
| - name: Upload coverage to Codecov | |
| if: ${{ success() }} | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: ./coverage.xml | |
| flags: unittests | |
| conda: | |
| runs-on: ubuntu-latest | |
| env: | |
| PYTHON: "3.11" | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ env.PYTHON }} | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| python-version: ${{ env.PYTHON }} | |
| activate-environment: pya | |
| environment-file: pyaerocom_env.yml | |
| - name: Conda info | |
| run: | | |
| conda --version | |
| conda info --envs | |
| which python | |
| python --version | |
| - name: Install pyaerocom | |
| run: python -m pip install . --no-deps | |
| - name: Run pytest | |
| run: python -m pytest -ra -q --cov --no-cov-on-fail --cov-report xml |