Fix merging test

metagenopolis · Oct 31, 2024 · d80eee3 · d80eee3
1 parent 3a783c6
commit d80eee3
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Showing 2 changed files with 4 additions and 2 deletions.
diff --git a/meteor/merging.py b/meteor/merging.py
@@ -131,7 +131,7 @@ def extract_json_info(
                 for my_field in param_dict[my_section]
             )
         except AssertionError:
-            logging.error("Missing required fields in census ini file.")
+            logging.error("Missing required fields in census json file.")
             sys.exit(1)
         # Get values of each field (remove the section information)
         information = {

diff --git a/meteor/tests/test_merging.py b/meteor/tests/test_merging.py
@@ -140,9 +140,11 @@ def test_compare(merging_profiles: Merging) -> None:
             "trim",
             "alignment_number",
             "mapping_type",
-            "identity_threshold",
             "database_type",
         ],
+        "counting": [
+            "identity_threshold",
+        ],
         "profiling_parameters": [""],
     }
     # Retrieve information about parameters