Improve readability

metagenopolis · Sep 6, 2024 · d385cf6 · d385cf6
1 parent e4f8ca1
commit d385cf6
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/meteor/variantcalling.py b/meteor/variantcalling.py
@@ -336,9 +336,9 @@ def create_consensus(
                                                 )
                                             )
                                         )
-                                        consensus[record.pos + i - 1] = self.IUPAC[mnv]
+                                        consensus[record.start + i] = self.IUPAC[mnv]
                                 else:
-                                    consensus[record.pos - 1] = self.IUPAC[keep_alts]
+                                    consensus[record.start] = self.IUPAC[keep_alts]
                             # Update consensus array for each matching range
                             if gene_id in low_cov_sites.index:
                                 selection = low_cov_sites.loc[gene_id]