MDLS Downloading tool and Packaging tool

Scripts to downloads SNOMED release files from MLDS, index and publish a docker container. Uses Hermes for indexing and search capabilities.

Installation

pip install -r requirements.txt

Usage

List all the release files in a markdown table

python main.py list --members "IN, IHTSDO" > table.md

You can also view table.md, but it may not be up to date.

Get the id from the table and put them in a txt file - let's say releases.txt.

python main.py download --username <username> --password <password> releases.txt

Environment Variables

Variable	Notes
MLDS_DOWNLOAD_USERNAME	Username/Email to login
MLDS_DOWNLOAD_PASSWORD	Password to login
MLDS_DOWNLOAD_DIRECTORY	Output download directory
MLDS_LIST_MEMBERS	List of countries/members you want to include in the list command - eg: "IN, IHTSDO". Defaults to "*"