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Releases: maxsonBraunLab/cite_seq

Version 0.6

25 Mar 20:15
@gartician gartician
0.6
8bb9bc9
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Version 0.6 Latest
Latest

Differential analysis

  • create new conda envs to facilitate differential analysis + GO
  • add FindAllMarkers, FindConservedMarkers, and FindMarkersIdent
  • parallelize each DE scheme to minimize wait time
  • FindMarkersIdent sig results (up and down) per cluster are pushed through topGO

README
Better instructions on how to run it

Assets 2
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Version 0.5

18 Mar 21:19
@gartician gartician
0.5
f405cd0
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Version 0.5

Finished

  1. Preprocess
  2. Sample integration

Needs work
3. Cluster - needs feature plots option
4. Differential - add FindConservedMarkers, FindAllMarkers, GO for FindMarkersIdent

Assets 2
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