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version 0.2.22#62

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matthias-k merged 114 commits intomastermatthias-k/pysaliency:masterfrom devmatthias-k/pysaliency:devCopy head branch name to clipboardApr 14, 2024

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Commits

Commits on May 30, 2022

• WIP torch 1.11 compatibility

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• torch 1.11 compatibility

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• Merge branch 'dev' of github.com:matthias-k/pysaliency into dev

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Commits on May 31, 2022

• trying to solve h5py issues in github testing

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• fix numpy deprecation warnings

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• compare old and new torch gaussian implementations

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Commits on Jun 17, 2022

• Merge branch 'dev' of github.com:matthias-k/pysaliency into dev

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• Remove obsolete generics

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• Merge branch 'dev' of github.com:matthias-k/pysaliency into dev

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Commits on Jun 27, 2022

• mark MIT dataset tests as requiring matlab

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Commits on Jun 30, 2022

• Bugfix: convert saliency to float before computing NSS and CC

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• Bugfix: t_hist got replaced with y_hist in Fixations instances but not in FixationTrains instances

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• Feature: scanpaths_from_fixations

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Commits on Jul 1, 2022

• scanpath_fixation_attributes, auto-generation of attributes in FixationTrains

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• FixationTrains.train_lengths

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Commits on Jul 3, 2022

• COCO Search18

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• dataset filter "clip_out_of_stimulus_fixations"

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• Disable in-memory tests of external datasets

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Commits on Jul 4, 2022

• bugfix loading old fixation train files

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Commits on Jul 6, 2022

• FileStimuli.cached to control im memory caching of stimuli

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Commits on Jul 8, 2022

• Make LazyList use LRU caches to allow for limited caching

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Commits on Jul 16, 2022

• dataset config filter for removing out of stimulus fixations

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Commits on Jul 18, 2022

• slices of noncached file stimuli are also not cached

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Commits on Aug 2, 2022

• handle deprecation

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• Fix FileStimuli caching

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Commits on Aug 30, 2022

• MIT fixation durations with proper attributes

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Commits on Aug 31, 2022

• Option to get MIT1003 with initial fixation conistent with standard version

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• scanpaths_from_fixation now builds proper scanpath attributes

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Commits on Sep 1, 2022

• Bugfix: redundant computation in loglikelihood

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Commits on Sep 26, 2022

• Avoid f-style format strings to keep compatibility with older python versions

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Commits on Oct 11, 2022

• Make compatible with older imageio versions

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Commits on Oct 14, 2022

• More verbose debug output in directory models

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Commits on Oct 21, 2022

• bugfix torch dataset with saliency map models from image files

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Commits on Oct 22, 2022

• Bugfixes and better testing for torch saliency map conversion

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• Bugfixes

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• save and load torch saliency map processing models

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Commits on Oct 23, 2022

• cache_directory for optimize_for_information_gain

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Commits on Nov 3, 2022

• allow pathlib locations for hdf5

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Commits on Mar 5, 2023

• bugfix: adapt setup.py to moved scripts

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Commits on Apr 17, 2023

• skip failing theano tests

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• skip failing cached optimization tests

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• relax assertion for similarity optimization test

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• extend COCO-Search18: options for treating same images under different tasks as same or different

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• ScikitLearnImageCrossValidationGenerator: allow to only compare within certain attributes

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Commits on Apr 20, 2023

• add options to COCO commands

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• create_subset accepts boolean masks now

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Commits on Apr 29, 2023

• COCO Search18 subject ids are now zero indexed

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Commits on May 10, 2023

• Disable ssl when downloading VOC in Judd model

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Commits on Jun 19, 2023

• Adapt COCO Search18 dataset to website changes

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• Refactoring external models

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• COCO Freeview dataset

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• COCO Freeview test stimuli

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Commits on Jun 20, 2023

• COCO Freeview: Code for extracting test fixations

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Commits on Jun 21, 2023

• dataset slicing

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• DeepGaze models

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Commits on Jun 22, 2023

• Add torchvision to test setup

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• Bugfix

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Commits on Jun 26, 2023

• trying to fix failing test on github

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• plot_scanpath

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Commits on Jun 29, 2023

• Update COCO Freeview for new split data

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Commits on Jun 30, 2023

• cleanup

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Commits on Jul 2, 2023

• option for export_model_to_hdf5

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Commits on Jul 9, 2023

• keep API of external_models more consistent

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Commits on Jul 10, 2023

• Speed up torch SIM optimization by making sampling more efficient

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Commits on Jul 11, 2023

• Some extensions to ShuffledBaselineModel

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Commits on Jul 12, 2023

• Make KDEGoldModel more memory efficient by not keeping the fixations around

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Commits on Jul 14, 2023

• Extend average_predictions to be able to handle generators of long sequences in memory efficient way

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• Made ShuffledBaselineModel much more efficient in terms of memory and compute

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Commits on Jul 16, 2023

• Bugfix plot_scanpath

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Commits on Jul 17, 2023

• ShuffledAUCScanpathSaliencyMapModel

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Commits on Jul 19, 2023

• clear cache when setting LazyList.cache to False

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Commits on Jul 28, 2023

• ShuffledBaselineModel: option to not remove current prediction from average

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Commits on Aug 6, 2023

• Bugfix constructor Fixations

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Commits on Sep 27, 2023

• FixationTrains.set_scanpath_attribute

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  matthias-k

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• concatenate file stimuli, cleanup attribute handling

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• refactor and extend data concatenation tools

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Commits on Oct 13, 2023

• Feature: DVAAwareScanpathModel

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Commits on Oct 25, 2023

• Updated numba functions (#28)

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  hkhanuja

  and

  Harneet Singh Khanuja

  authored
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• add GeneralMixtureKernelDensityEstimator to baseline_utils for testing arbitrary regularization mixtures

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• add classes to baseline utils for efficiently computing crossvalidation scores of different baseline models

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• Updated changelog

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Commits on Oct 26, 2023

• Fix and refactor SALICON tests

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• Fix tests and GitHub test workflow (#29)

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Commits on Nov 2, 2023

• Update nusef.py (#31)

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  hkhanuja

  and

  matthias-k

  authored
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Commits on Nov 5, 2023

• run tests on PRs

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Commits on Nov 9, 2023

• Bugfix: NUSEF fixation locations often not correctly scaled to image … (#34)

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  matthias-k

  authored
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Commits on Nov 10, 2023

• Update dataset_config.py (#33)

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  hkhanuja

  authored
  4a846b8

Commits on Nov 14, 2023

• Added functionality to call filter functions from config file (#35)

  hkhanuja

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• fix rescaling bug in NUSEF (#36)

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  matthias-k

  authored
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Commits on Nov 18, 2023

• Make CrossvalMultipleRegularizations more effective for very large datasets (#37)

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• Speedup and output (#38)

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Commits on Nov 19, 2023

• specify number of parallel jobs for CrossvalMultipleRegularizations (#39)

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Commits on Nov 20, 2023

• parallelization (#40)

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Commits on Nov 25, 2023

• Remove buggy and uncessary crossval class (#41)

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  authored
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Commits on Dec 16, 2023

• Removing stimuli with no fixations (#42)

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  hkhanuja

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  16e212d

• allow filtering stimuli by multiple attribute values (#43)

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  matthias-k

  authored
  90d6a99

• Added remove stimuli with no fixation filter to dataset_config.py (#44)

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  hkhanuja

  authored
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Commits on Jan 22, 2024

• Added functionality to use combined centerbias (#45)

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Commits on Jan 26, 2024

• Save memory in gold standard crossvalidation (#46)

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  matthias-k

  authored
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Commits on Jan 27, 2024

• Bugfix: ExpSaliencyMapModel doesn't apply to probabilistic models (#47)

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  matthias-k

  authored
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• Don't compute saliency maps in NSS if there are no fixations on the image (#48)

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  authored
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Commits on Mar 2, 2024

• [Bugfix] stimuli with attributes couldn't be sliced with lists

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  matthias-k

  committed
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• [Bugfix] Precomputed models failed for subsets of FileStimuli which where in a common sub directory

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• Merge pull request #52 from matthias-k/bugfix-hdf5-filenames-for-substimuli

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Commits on Mar 8, 2024

• StimulusDependentSaliencyMapModel (#53)

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• Stimuli can be filtered by boolean masks (#54)

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Commits on Mar 10, 2024

• Warnings for deprecated attribute in FixationTrains was oversensitive (#55)

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Commits on Mar 14, 2024

• Better error message in HDF5 models (#56)

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  authored
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• [Bugfix] CAT2000 contained unnecessary files (#57)

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Commits on Mar 23, 2024

• ENH: check prediction of log densities and saliency maps before computing metrics (#58)

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  authored
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Commits on Mar 25, 2024

• ENH: make MIT1003 loading less verbose (#59)

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  authored
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Commits on Mar 26, 2024

• Small bugs and enhancements (#60)

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  matthias-k

  authored
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• new tutorial (#61)

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Commits on Apr 14, 2024

• publish 0.2.22

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