feat: update for 2024

.gitignore

@@ -129,4 +129,8 @@ dmypy.json
 .pyre/
 
 .DS_Store
-.vscode/
+.vscode/
+
+vendor/
+_site/
+.bundle

Gemfile.lock

@@ -1,47 +1,49 @@
 GEM
   remote: https://rubygems.org/
   specs:
-    activesupport (6.1.7.3)
+    activesupport (6.1.7.7)
       concurrent-ruby (~> 1.0, >= 1.0.2)
       i18n (>= 1.6, < 2)
       minitest (>= 5.1)
       tzinfo (~> 2.0)
       zeitwerk (~> 2.3)
-    addressable (2.8.1)
+    addressable (2.8.6)
       public_suffix (>= 2.0.2, < 6.0)
+    base64 (0.2.0)
     coffee-script (2.4.1)
       coffee-script-source
       execjs
-    coffee-script-source (1.11.1)
+    coffee-script-source (1.12.2)
     colorator (1.1.0)
-    commonmarker (0.23.8)
-    concurrent-ruby (1.2.2)
-    dnsruby (1.61.9)
-      simpleidn (~> 0.1)
+    commonmarker (0.23.10)
+    concurrent-ruby (1.2.3)
+    dnsruby (1.72.0)
+      simpleidn (~> 0.2.1)
     em-websocket (0.5.3)
       eventmachine (>= 0.12.9)
       http_parser.rb (~> 0)
     ethon (0.16.0)
       ffi (>= 1.15.0)
     eventmachine (1.2.7)
-    execjs (2.8.1)
-    faraday (2.7.4)
+    execjs (2.9.1)
+    faraday (2.8.1)
+      base64
       faraday-net_http (>= 2.0, < 3.1)
       ruby2_keywords (>= 0.0.4)
     faraday-net_http (3.0.2)
-    ffi (1.15.5)
+    ffi (1.16.3)
     forwardable-extended (2.6.0)
-    gemoji (3.0.1)
-    github-pages (228)
-      github-pages-health-check (= 1.17.9)
-      jekyll (= 3.9.3)
-      jekyll-avatar (= 0.7.0)
-      jekyll-coffeescript (= 1.1.1)
+    gemoji (4.1.0)
+    github-pages (231)
+      github-pages-health-check (= 1.18.2)
+      jekyll (= 3.9.5)
+      jekyll-avatar (= 0.8.0)
+      jekyll-coffeescript (= 1.2.2)
       jekyll-commonmark-ghpages (= 0.4.0)
-      jekyll-default-layout (= 0.1.4)
-      jekyll-feed (= 0.15.1)
+      jekyll-default-layout (= 0.1.5)
+      jekyll-feed (= 0.17.0)
       jekyll-gist (= 1.5.0)
-      jekyll-github-metadata (= 2.13.0)
+      jekyll-github-metadata (= 2.16.1)
       jekyll-include-cache (= 0.2.1)
       jekyll-mentions (= 1.6.0)
       jekyll-optional-front-matter (= 0.3.2)
@@ -68,28 +70,28 @@ GEM
       jekyll-theme-tactile (= 0.2.0)
       jekyll-theme-time-machine (= 0.2.0)
       jekyll-titles-from-headings (= 0.5.3)
-      jemoji (= 0.12.0)
-      kramdown (= 2.3.2)
+      jemoji (= 0.13.0)
+      kramdown (= 2.4.0)
       kramdown-parser-gfm (= 1.1.0)
       liquid (= 4.0.4)
       mercenary (~> 0.3)
       minima (= 2.5.1)
       nokogiri (>= 1.13.6, < 2.0)
-      rouge (= 3.26.0)
+      rouge (= 3.30.0)
       terminal-table (~> 1.4)
-    github-pages-health-check (1.17.9)
+    github-pages-health-check (1.18.2)
       addressable (~> 2.3)
       dnsruby (~> 1.60)
-      octokit (~> 4.0)
-      public_suffix (>= 3.0, < 5.0)
+      octokit (>= 4, < 8)
+      public_suffix (>= 3.0, < 6.0)
       typhoeus (~> 1.3)
     html-pipeline (2.14.3)
       activesupport (>= 2)
       nokogiri (>= 1.4)
     http_parser.rb (0.8.0)
-    i18n (1.12.0)
+    i18n (1.14.4)
       concurrent-ruby (~> 1.0)
-    jekyll (3.9.3)
+    jekyll (3.9.5)
       addressable (~> 2.4)
       colorator (~> 1.0)
       em-websocket (~> 0.5)
@@ -102,27 +104,27 @@ GEM
       pathutil (~> 0.9)
       rouge (>= 1.7, < 4)
       safe_yaml (~> 1.0)
-    jekyll-avatar (0.7.0)
+    jekyll-avatar (0.8.0)
       jekyll (>= 3.0, < 5.0)
-    jekyll-coffeescript (1.1.1)
+    jekyll-coffeescript (1.2.2)
       coffee-script (~> 2.2)
-      coffee-script-source (~> 1.11.1)
+      coffee-script-source (~> 1.12)
     jekyll-commonmark (1.4.0)
       commonmarker (~> 0.22)
     jekyll-commonmark-ghpages (0.4.0)
       commonmarker (~> 0.23.7)
       jekyll (~> 3.9.0)
       jekyll-commonmark (~> 1.4.0)
       rouge (>= 2.0, < 5.0)
-    jekyll-default-layout (0.1.4)
-      jekyll (~> 3.0)
-    jekyll-feed (0.15.1)
+    jekyll-default-layout (0.1.5)
+      jekyll (>= 3.0, < 5.0)
+    jekyll-feed (0.17.0)
       jekyll (>= 3.7, < 5.0)
     jekyll-gist (1.5.0)
       octokit (~> 4.2)
-    jekyll-github-metadata (2.13.0)
+    jekyll-github-metadata (2.16.1)
       jekyll (>= 3.4, < 5.0)
-      octokit (~> 4.0, != 4.4.0)
+      octokit (>= 4, < 7, != 4.4.0)
     jekyll-include-cache (0.2.1)
       jekyll (>= 3.7, < 5.0)
     jekyll-mentions (1.6.0)
@@ -193,38 +195,40 @@ GEM
       jekyll (>= 3.3, < 5.0)
     jekyll-watch (2.2.1)
       listen (~> 3.0)
-    jemoji (0.12.0)
-      gemoji (~> 3.0)
+    jemoji (0.13.0)
+      gemoji (>= 3, < 5)
       html-pipeline (~> 2.2)
       jekyll (>= 3.0, < 5.0)
-    kramdown (2.3.2)
+    kramdown (2.4.0)
       rexml
     kramdown-parser-gfm (1.1.0)
       kramdown (~> 2.0)
     liquid (4.0.4)
-    listen (3.8.0)
+    listen (3.9.0)
       rb-fsevent (~> 0.10, >= 0.10.3)
       rb-inotify (~> 0.9, >= 0.9.10)
     mercenary (0.3.6)
-    mini_portile2 (2.8.0)
+    mini_portile2 (2.8.5)
     minima (2.5.1)
       jekyll (>= 3.5, < 5.0)
       jekyll-feed (~> 0.9)
       jekyll-seo-tag (~> 2.1)
-    minitest (5.11.3)
-    nokogiri (1.13.8)
+    minitest (5.22.3)
+    nokogiri (1.13.10)
       mini_portile2 (~> 2.8.0)
+      racc (~> 1.4)
     octokit (4.25.1)
       faraday (>= 1, < 3)
       sawyer (~> 0.9)
     pathutil (0.16.2)
       forwardable-extended (~> 2.6)
-    public_suffix (4.0.7)
+    public_suffix (5.0.4)
+    racc (1.7.3)
     rb-fsevent (0.11.2)
     rb-inotify (0.10.1)
       ffi (~> 1.0)
-    rexml (3.1.9.1)
-    rouge (3.26.0)
+    rexml (3.2.6)
+    rouge (3.30.0)
     ruby2_keywords (0.0.5)
     rubyzip (2.3.2)
     safe_yaml (1.0.5)
@@ -240,15 +244,15 @@ GEM
       unf (~> 0.1.4)
     terminal-table (1.8.0)
       unicode-display_width (~> 1.1, >= 1.1.1)
-    typhoeus (1.4.0)
+    typhoeus (1.4.1)
       ethon (>= 0.9.0)
     tzinfo (2.0.6)
       concurrent-ruby (~> 1.0)
     unf (0.1.4)
       unf_ext
-    unf_ext (0.0.8.2)
+    unf_ext (0.0.9.1)
     unicode-display_width (1.8.0)
-    zeitwerk (2.6.7)
+    zeitwerk (2.6.13)
 
 PLATFORMS
   ruby

_config.yml

@@ -1,15 +1,15 @@
 title: LLM in Chemistry and Materials
 nav_title: LLM in Chemistry and Materials
 
-event_date: Mar 29-30
-registration_opens_date: 15 March 2023
-registration_closes_date: 29 March 2023
+event_date: May 8--9, 2024
+registration_opens_date: 21 March 2024
+registration_closes_date: 1 May 2024
 
 author:
 mailbox_address:
 
 description: |
-  The LLM March Madness Materials / Chemistry Hackathon is a virtual hackathon designed to explore and showcase innovative applications of large language models in the fields of materials science and chemistry.
+  The LLM March Madness Materials / Chemistry Hackathon is a hackathon designed to explore and showcase innovative applications of large language models in the fields of materials science and chemistry.
 
 url: "https://materials-data-facility/llm-hackathon"
 github_repo: materials-data-facility
@@ -20,7 +20,10 @@ theme: minima
 # and registration_status flags below
 header_pages:
   - registration.md
+  - guidelines.md
+  - schedule.md
   - resources.md
+  - local_events.md
   - about.md
 
 # Event status

about.md

@@ -25,21 +25,6 @@ To contact us about the hackathon, please contact us on Twitter or Slack. -->
             <br>Group Leader - AI and data infrastructure for science 
         </td>
     </tr>
-    <tr>
-        <td>
-            <img alt="Andrew White" src="https://pbs.twimg.com/profile_images/1610864530216591361/9_HA-bt8_400x400.jpg">
-        </td>
-        <td>
-            <strong>Andrew White</strong>
-             <span class="profile-links">
-                <a title="Website" href="https://thewhitelab.org/"><i class="bi bi-globe2"></i></a>
-                <a title="GitHub" href="https://github.com/whitead"><i class="bi bi-github"></i></a>
-                <a title="Twitter" href="https://twitter.com/andrewwhite01"><i class="bi bi-twitter"></i></a>
-            </span>
-            <br>University of Rochester, Vial
-            <br>Professor, VP of AI
-        </td>
-    </tr>
     <tr>
         <td>
             <img alt="Kevin Jablonka" src="../assets/kevin.jpg">
@@ -51,8 +36,8 @@ To contact us about the hackathon, please contact us on Twitter or Slack. -->
                 <a title="GitHub" href="https://github.com/kjappelbaum"><i class="bi bi-github"></i></a>
                 <a title="Twitter" href="https://twitter.com/kmjablonka"><i class="bi bi-twitter"></i></a>
             </span>
-            <br>EPFL
-            <br>PhD Student
+            <br>Helmholtz Institute for Polymers in Energy Applications
+            <br>Group Leader
         </td>
     </tr>
     <tr>

agenda.md

@@ -7,31 +7,12 @@ event_status:
  - now
 ---
 
-## Now - Mar 29: Brainstorm, build, team
 
-Brainstorm, build, team up.
-
-<!-- {:.agenda} -->
-
-
-## Day 1: Mar 29
+## Day 1: May 8
 
 Live Hackathon Day! 💻 Teams will be coordinating and there will be centrally run live sessions. Video submissions due!
 
-{:.agenda}
-<!-- Time (BST)    | Activity | Where to go
-------------- | -------- | -----------
-09:15 – 09:30 | Zoom meeting opens for informal networking | Zoom main room
-09:30 – 10:00 | **Welcome talk**<br>Speaker name | Zoom main room
-10:00 – 11:55 | **Breakout groups**<br>Recap and continue working on projects | Zoom breakout rooms
-12:00 – 12:30 | **Yoga**<br>Take some time away from your keyboard | Zoom main room
-12:30 – 13:30 | Lunch break |
-13:30 – 16:30 | **Breakout groups**<br>Continue working on projects | Zoom breakout rooms
-16:30 – 17:00 | **End of day tidy-up**<br>Write up<br>Commit your changes to GitHub<br>Tidy Group Workspace | Zoom breakout rooms
-17:00 – 17:25 | **Group updates**<br>90 seconds per group<br>Zero or one slide 😊<br>How things are going; what problems you have faced | Zoom main room
-17:25 – 17:30 | **Close of day** | Zoom main room -->
-
 
-## Day 2: Mar 30
+## Day 2: May 9
 
 Live session to announce prizes.

guidelines.md

@@ -0,0 +1,43 @@
+---
+title: Frequently Asked Questions
+menu_title: FAQ
+---
+
+## Can I participate in multiple projects?
+
+Yes! You can participate in as many projects as you like. However, we recommend that you focus on one project at a time to ensure that you can make a meaningful contribution.
+
+## Do I need to use LLMs in my project?
+
+Yes. The goal of the hackathon is to explore the capabilities of LLMs. However, you are free to use any LLM you like, and we interpret the term "LLM" broadly. For example, you could also use state-space models like MAMBA.
+
+## How do I submit my project?
+
+You will submit your project by 
+
+1. Posting a video on social media (Twitter, LinkedIn, or YouTube) with the hashtag #LLMMatHack.
+2. You will post a link to your post in the Slack channel #project-submissions.
+3. You will include a link to a Google Docs with a brief description of your project and a link to your code/data as well as a listing of all team members (with affiliations, emails, and ORCIDs). 
+
+## Hackathon paper 
+
+We [again](https://pubs.rsc.org/en/content/articlelanding/2023/dd/d3dd00113j) aim to publish a paper about the hackathon, and we invite all participants to contribute.
+
+To be included as an author, you must meet the following guidelines:
+
+- You must have _actively_ participated in the hackathon. This must be evident from commit history, public discussions, or other forms of engagement.
+- Your submission must be reusable. That is, it must be possible for others to build upon your work. For coding projects, this means: 
+  - Your code must be well-documented (e.g., with docstrings, comments, and a README file).
+  - Your code must be available on a public repository (e.g., GitHub).
+  - Your code must be licensed under an open-source license (e.g., MIT, BSD, or Apache).
+  - Your dependencies must be clearly listed (e.g., in a `requirements.txt` file).
+  - Your code must include a narrated example/tutorial (e.g., in a Jupyter notebook).
+
+  For benchmark submissions, this means:
+    - Your dataset must be well-documented (e.g., with a README file).
+    - Your dataset must be available on a public repository (e.g., Zenodo).
+    - Your dataset must be licensed under an open-source license (e.g., CC-BY).
+    - Your dataset must be accompanied by a data dictionary, schema, or similar.
+    - Your dataset must be accompanied by a narrated discussion on the scope and limitations of the dataset.
+
+    If you are not sure how to meet these requirements, please ask for help.

index.md

@@ -5,13 +5,16 @@ menu_title: Home
 menu_icon: house-door
 ---
 
+<center>
+    <img src='assets/banner2.png'>
+</center>
 
 {:.secondary}
 # {{ site.event_date }}
 
 <!-- REMOVE THIS SECTION when you use this template -->
 <div class="lead" markdown="1">
-Welcome to the LLM March Madness Materials / Chemistry Hackathon, a virtual hackathon designed to explore and showcase innovative applications of large language models in the fields of materials science and chemistry. Participants from diverse backgrounds, including scientists, engineers, developers, and students, will come together to leverage the power of AI to address complex challenges and unlock new frontiers in these rapidly evolving domains.
+LLM Hackathon for Applications in Materials and Chemistry, a virtual hackathon designed to explore and showcase innovative applications of large language models in the fields of materials science and chemistry. Participants from diverse backgrounds, including scientists, engineers, developers, and students, will come together to leverage the power of AI to address complex challenges and unlock new frontiers in these rapidly evolving domains.
 </div>
 <!-- END of section to remove -->
 
@@ -53,6 +56,8 @@ The event will take place virtually, using a combination of **video
 conferencing** (Zoom) for meetings and seminars, and **discussion forums**
 (Slack, Miro). Slack, Miro, and Zoom links will be shared upon registration. 
 
+In parallel, there will be a series of on-site events at locations around the world. These events will be organized by local hosts and will be connected to the main event via video conferencing. You can find a list of local events on the [Local Events](/local_events) page.
+
 ## Prizes
 
 Will be announced soon!