Fix false positive matches from other parts in the BIDS filename (e.g…

…. files named `sub-01-acq-fieldmap_magnitude1.nii.gz` (see github issue nipreps#264)
marcelzwiers · Apr 16, 2024 · a0ca25a · a0ca25a
1 parent 73d717a
commit a0ca25a
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/sdcflows/fieldmaps.py b/sdcflows/fieldmaps.py
@@ -340,9 +340,9 @@ def __attrs_post_init__(self):
                 try:
                     new_path = (
                         sources[0].parent / sources[0].name
-                        .replace("fieldmap", "magnitude")
-                        .replace("diff", "1")
-                        .replace("phase", "magnitude")
+                        .replace("_fieldmap", "_magnitude")
+                        .replace("_phasediff", "_phase1")
+                        .replace("_phase", "_magnitude")
                     )
                     self.sources.append(FieldmapFile(new_path))
                 except Exception: