Merge pull request #325 from vincentkelleher/update_ifabsent_utils_re…

…ference remove references to the now delete linkml_runtime.utils.ifabsent_functions
linkml · Jul 5, 2024 · 984e4b2 · 984e4b2
2 parents 494edda + 7ef6d90
commit 984e4b2
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diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
@@ -63,4 +63,4 @@ jobs:
           name: codecov-results-${{ matrix.os }}-${{ matrix.python-version }}
           token: ${{ secrets.CODECOV_TOKEN }}
           file: coverage.xml
-          fail_ci_if_error: true
+          fail_ci_if_error: false
diff --git a/linkml_runtime/linkml_model/json/meta.json b/linkml_runtime/linkml_model/json/meta.json
@@ -2590,7 +2590,7 @@
     {
       "name": "ifabsent",
       "definition_uri": "https://w3id.org/linkml/ifabsent",
-      "description": "function that provides a default value for the slot.  Possible values for this slot are defined in\nlinkml_runtime.utils.ifabsent_functions.default_library:\n  * [Tt]rue -- boolean True\n  * [Ff]alse -- boolean False\n  * int(value) -- integer value\n  * str(value) -- string value\n  * default_range -- schema default range\n  * bnode -- blank node identifier\n  * slot_uri -- URI for the slot\n  * class_curie -- CURIE for the containing class\n  * class_uri -- URI for the containing class",
+      "description": "function that provides a default value for the slot.\n  * [Tt]rue -- boolean True\n  * [Ff]alse -- boolean False\n  * int(value) -- integer value\n  * str(value) -- string value\n  * default_range -- schema default range\n  * bnode -- blank node identifier\n  * slot_uri -- URI for the slot\n  * class_curie -- CURIE for the containing class\n  * class_uri -- URI for the containing class",
       "from_schema": "https://w3id.org/linkml/meta",
       "close_mappings": [
         "https://w3id.org/shacl/defaultValue"

diff --git a/linkml_runtime/linkml_model/owl/meta.owl.ttl b/linkml_runtime/linkml_model/owl/meta.owl.ttl
@@ -1421,6 +1421,14 @@ linkml:ifabsent a owl:ObjectProperty,
   * EnumName(PermissibleValue) -- enum value""" ;
     skos:inScheme linkml:meta .
 
+linkml:implements a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "implements" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:Uriorcurie ;
+    skos:definition "An element in another schema which this element conforms to. The referenced element is not imported into the schema for the implementing element. However, the referenced schema may be used to check conformance of the implementing element." ;
+    skos:inScheme linkml:meta .
+
 linkml:import_as a owl:ObjectProperty,
         linkml:SlotDefinition ;
     rdfs:label "import_as" ;

diff --git a/linkml_runtime/linkml_model/rdf/meta.model.ttl b/linkml_runtime/linkml_model/rdf/meta.model.ttl
@@ -1228,8 +1228,7 @@ linkml:iec61360code a linkml:SlotDefinition ;
 
 linkml:ifabsent a linkml:SlotDefinition ;
     skos:closeMatch sh1:defaultValue ;
-    skos:definition """function that provides a default value for the slot.  Possible values for this slot are defined in
-linkml_runtime.utils.ifabsent_functions.default_library:
+    skos:definition """function that provides a default value for the slot.
   * [Tt]rue -- boolean True
   * [Ff]alse -- boolean False
   * int(value) -- integer value

diff --git a/linkml_runtime/linkml_model/rdf/meta.ttl b/linkml_runtime/linkml_model/rdf/meta.ttl
@@ -1228,8 +1228,7 @@ linkml:iec61360code a linkml:SlotDefinition ;
 
 linkml:ifabsent a linkml:SlotDefinition ;
     skos:closeMatch sh1:defaultValue ;
-    skos:definition """function that provides a default value for the slot.  Possible values for this slot are defined in
-linkml_runtime.utils.ifabsent_functions.default_library:
+    skos:definition """function that provides a default value for the slot.
   * [Tt]rue -- boolean True
   * [Ff]alse -- boolean False
   * int(value) -- integer value

diff --git a/linkml_runtime/linkml_model/sqlddl/meta.sql b/linkml_runtime/linkml_model/sqlddl/meta.sql
@@ -313,7 +313,7 @@
 --     * Slot: multivalued Description: true means that slot can have more than one value
 --     * Slot: inherited Description: true means that the *value* of a slot is inherited by subclasses
 --     * Slot: readonly Description: If present, slot is read only.  Text explains why
---     * Slot: ifabsent Description: function that provides a default value for the slot.  Possible values for this slot are defined inlinkml_runtime.utils.ifabsent_functions.default_library:  * [Tt]rue -- boolean True  * [Ff]alse -- boolean False  * int(value) -- integer value  * str(value) -- string value  * default_range -- schema default range  * bnode -- blank node identifier  * slot_uri -- URI for the slot  * class_curie -- CURIE for the containing class  * class_uri -- URI for the containing class
+--     * Slot: ifabsent Description: function that provides a default value for the slot. * [Tt]rue -- boolean True  * [Ff]alse -- boolean False  * int(value) -- integer value  * str(value) -- string value  * default_range -- schema default range  * bnode -- blank node identifier  * slot_uri -- URI for the slot  * class_curie -- CURIE for the containing class  * class_uri -- URI for the containing class
 --     * Slot: list_elements_unique Description: If True, then there must be no duplicates in the elements of a multivalued slot
 --     * Slot: list_elements_ordered Description: If True, then the order of elements of a multivalued slot is guaranteed to be preserved. If False, the order may still be preserved but this is not guaranteed
 --     * Slot: shared Description: If True, then the relationship between the slot domain and range is many to one or many to many