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Merge remote-tracking branch 'upstream/devel' into devel #100

Merge remote-tracking branch 'upstream/devel' into devel

Merge remote-tracking branch 'upstream/devel' into devel #100

Triggered via push December 12, 2024 21:18
Status Failure
Total duration 20m 51s
Artifacts 3

check-bioc.yml

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Matrix: build-check
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4 errors and 30 warnings
macOS-latest (4.3)
No such keg: /opt/homebrew/Cellar/[email protected]
macOS-latest (4.3)
Process completed with exit code 1.
ubuntu-latest (4.3)
Process completed with exit code 1.
windows-latest (4.3)
Process completed with exit code 1.
macOS-latest (4.3)
harfbuzz 10.1.0 is already installed and up-to-date. To reinstall 10.1.0, run: brew reinstall harfbuzz
macOS-latest (4.3)
fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi
macOS-latest (4.3)
macOS's Gatekeeper has been disabled for this Cask
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-arm64/contrib/4.3:
macOS-latest (4.3)
pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf
macOS-latest (4.3)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ubuntu-latest (4.3)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.3:
windows-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.3:

Artifacts

Produced during runtime
Name Size
Linux-biocversion-RELEASE_3_17-r-4.3-results
6.62 MB
Windows-biocversion-RELEASE_3_17-r-4.3-results
2.83 MB
macOS-biocversion-RELEASE_3_17-r-4.3-results
8.12 MB