Add notes and plotly code

lcolladotor · Mar 24, 2020 · fac3382 · fac3382
1 parent 45596be
commit fac3382
Showing 1 changed file with 5 additions and 0 deletions.
diff --git a/R/01-introduction.R b/R/01-introduction.R
@@ -49,6 +49,11 @@ sce$clusters <- factor(igraph::cluster_louvain(g)$membership)
 # Visualization.
 scater::plotUMAP(sce, colour_by = "clusters")
 
+p <- scater::plotUMAP(sce, colour_by = "clusters")
+plotly::ggplotly(p)
 
 ## Notes
 
+# Might be better to subset the sce object before running the plotly code
+
+