infection

A library for experimenting with SIR model.

Modes

• standard package importing
• stand-alone CLI program

Installation

1. clone repository

   git clone https://github.com/l3nn4rt/infection

2. install dependencies

   python -m pip install ./infection

Usage

All modules have an help command:

python -m infection.generation --help
python -m infection.simulation --help
python -m infection.visualization --help

Example

1. create a graph

   python -m infection.generation --save TORUS_U_ERDOS_RENYI -c 5 -r 6 -p .1
   GRAPH_UID # save this

2. simulate infection evolution over graph

   python -m infection.simulation --save -g $GRAPH_UID -p .3 -s 1
   EVOLUTION_UID # save this

3. show animation and timeline

   python -m infection.visualization -e $EVOLUTION_UID -a -t