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70 Open 156 Closed
70 Open 156 Closed
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Issues list

Expression plots with minimaps don't work on the CBU machines 🪲 bug Something isn't working hpc 📈 plotting functionality Any issues related to plotting ❓ question Further information is requested
#409 opened Nov 15, 2024 by caiw
6
Expression plot minimaps don't work on Windows ⏸️ blocked/on-hold Blocked or otherwise waiting for something 🪲 bug Something isn't working 📈 plotting functionality Any issues related to plotting
#408 opened Nov 15, 2024 by caiw
1
Is it possible to raise the number of derangements for source past 6? gridsearch Related to the gridsearch hpc
#406 opened Nov 14, 2024 by neukym
Make denoising an operation on ExpressionSets 💪 enhancement New feature or request IPPM generation
#404 opened Nov 8, 2024 by caiw
1
@caiw
Separate denoising and graph-plotting IPPM generation ⚙️ refactor Changes which relate to code structure rather than functionality
#403 opened Nov 8, 2024 by caiw
1
@caiw
IPPMs should be buildable from SensorExpressionSets 💪 enhancement New feature or request IPPM generation
#402 opened Nov 8, 2024 by caiw
1
@caiw
Almost duplicated functionality between plot.expression_plot and ippm.stem_plot IPPM generation ⚙️ refactor Changes which relate to code structure rather than functionality
#400 opened Nov 8, 2024 by caiw
1
Loading .nkg file fails on Windows 🪲 bug Something isn't working 📄 .nkg files
#399 opened Nov 8, 2024 by caiw
@young-x-skyee
7
Rename "function" to "transform" in .ngk files 💤 low priority 📄 .nkg files
#394 opened Nov 1, 2024 by caiw
Do we know why random tests are failing? 🪲 bug Something isn't working 📋 tests
#388 opened Oct 23, 2024 by neukym
1
@caiw
4
Automatically determine IPPM parallel-vs-serial grouping ⏸️ blocked/on-hold Blocked or otherwise waiting for something 💪 enhancement New feature or request IPPM generation 📈 plotting functionality Any issues related to plotting
#377 opened Sep 21, 2024 by caiw
1
@caiw
Missing the zero latency results using gridsearch 🪲 bug Something isn't working gridsearch Related to the gridsearch
#375 opened Sep 20, 2024 by young-x-skyee
IPPM code complains if not all colours specified 🪲 bug Something isn't working IPPM generation 💤 low priority 📈 plotting functionality Any issues related to plotting
#371 opened Sep 13, 2024 by caiw
Option to add equations to IPPM plots 💪 enhancement New feature or request IPPM generation 📈 plotting functionality Any issues related to plotting
#369 opened Sep 13, 2024 by caiw
@caiw
1
IPPM code has some mix-up between mutating and non-mutating function calls 👷 design standards IPPM generation ⚙️ refactor Changes which relate to code structure rather than functionality
#367 opened Sep 13, 2024 by caiw
1
@caiw
Refine IPPM graph datastructure 👷 design standards ❓ discussion needed Extra discussion is needed before work can commence IPPM generation ⚙️ refactor Changes which relate to code structure rather than functionality
#362 opened Sep 6, 2024 by caiw
1
@caiw
1
Doing expression plot is slow for 1000+ functions ❓ discussion needed Extra discussion is needed before work can commence ⏱️ optimisation 📈 plotting functionality Any issues related to plotting
#354 opened Aug 7, 2024 by young-x-skyee
3
Unit test test_expression.py intermittently fails when run in CI 💤 low priority 📋 tests
#350 opened Aug 2, 2024 by caiw
Gridsearch normalisation not working for language after the latest update 🪲 bug Something isn't working ❓ discussion needed Extra discussion is needed before work can commence gridsearch Related to the gridsearch
#349 opened Jul 29, 2024 by young-x-skyee
@caiw @young-x-skyee
6
Do we need to supply both --seconds-per-split and --n-splits to gridsearch? give it a go! The change to be made isn't too complex or has been described as part of the issue or discussion gridsearch Related to the gridsearch ❓ question Further information is requested
#344 opened Jul 27, 2024 by caiw
Gridsearch does not support some latency options 🪲 bug Something isn't working ❓ discussion needed Extra discussion is needed before work can commence gridsearch Related to the gridsearch
#338 opened Jul 26, 2024 by young-x-skyee
1
Loading the FSAverageDataset causes a requests.exceptions.ConnectionError 🪲 bug Something isn't working 📈 plotting functionality Any issues related to plotting
#327 opened Jul 19, 2024 by caiw
1
Gridsearch always morphs regardless of arguments 🪲 bug Something isn't working gridsearch Related to the gridsearch
#326 opened Jul 19, 2024 by caiw
Running plotting with brain maps no longer works since move to kymata-core 🪲 bug Something isn't working 📈 plotting functionality Any issues related to plotting
#323 opened Jul 16, 2024 by neukym
@caiw
3
Can we make MRICron-style minimaps for sensor plots? 💪 enhancement New feature or request 📈 plotting functionality Any issues related to plotting
#321 opened Jul 12, 2024 by caiw
1
ProTip! What’s not been updated in a month: updated:<2024-10-18.