[js] update a few packages (microsoft#18499)

### Description
[js] update a few packages

- update semver
- update reference of onnx_proto to local folder in order to upgrade
[email protected]

Resolve AB#18513

js/node/package.json

@@ -19,6 +19,7 @@
   },
   "scripts": {
     "buildr": "tsc && node ./script/build --config=RelWithDebInfo",
+    "preprepare": "node -e \"require('node:fs').copyFileSync('./node_modules/long/index.d.ts', './node_modules/long/umd/index.d.ts')\"",
     "prepare": "tsc --build script test .",
     "rebuild": "tsc && node ./script/build --rebuild",
     "rebuildd": "tsc && node ./script/build --rebuild --config=Debug",
@@ -39,7 +40,7 @@
     "jsonc": "^2.0.0",
     "minimist": "^1.2.8",
     "node-addon-api": "^6.0.0",
-    "onnx-proto": "^8.0.1"
+    "protobufjs": "^7.2.4"
   },
   "main": "dist/index.js",
   "os": [

js/node/test/ort-schema/protobuf/.gitignore

@@ -0,0 +1,2 @@
+!onnx.js
+!onnx.d.ts

js/node/test/ort-schema/protobuf/README.md

@@ -0,0 +1,21 @@
+# ONNX protobuf
+
+This directory contains generated protobuf definition for onnx:
+
+- onnx.js
+- onnx.d.ts
+
+These files are generated from [a fork of onnx-proto](https://github.com/fs-eire/onnx-proto/tree/update-v9).
+
+The ONNX protobuf uses [email protected], which depends on [email protected], the version contains 2 bugs:
+
+- type export does not work with commonjs. described in https://github.com/dcodeIO/long.js/pull/124. added a "postinstall" script to fix.
+- in the generated typescript declaration file 'onnx.d.ts', the following line:
+  ```ts
+  import Long = require("long");
+  ```
+  need to be replaced to fix type import error:
+  ```ts
+  import Long from "long";
+  ```
+  this replacement is done and code format is also applied to file 'onnx.d.ts'.