Weekly testing and recalibration of test timings #46
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Weekly testing and recalibration of test timings | |
| on: | |
| schedule: | |
| - cron: "5 3 * * 2" | |
| jobs: | |
| calibrate-timings: | |
| runs-on: ubuntu-latest | |
| permissions: | |
| pull-requests: write | |
| contents: write | |
| steps: | |
| - name: install | |
| uses: khanlab/actions/.github/actions/[email protected] | |
| id: setup | |
| with: | |
| python-version: "3.8" | |
| install-library: true | |
| - name: build docker test container | |
| uses: ./.github/actions/build-test-container | |
| with: | |
| python-version: ${{ steps.setup.outputs.python-version }} | |
| load: true | |
| - name: Count current number of tests | |
| id: count | |
| run: | | |
| echo "NUM=$( | |
| poetry run poe -q test --co -q --disable-warnings | head -n -2 | wc -l | |
| )" >> "$GITHUB_OUTPUT" | |
| - name: Count number of timed tests | |
| id: timed-count | |
| run: | | |
| echo "NUM=$(jq 'keys | length' .test_durations)" >> "$GITHUB_OUTPUT" | |
| - name: Test with pytest | |
| if: ${{ steps.count.outputs.NUM != steps.timed-count.outputs.NUM }} | |
| env: | |
| HYPOTHESIS_PROFILE: pr | |
| run: >- | |
| poetry run pytest -n auto --store-durations --clean-durations | |
| --doctest-modules --ignore=docs | |
| --ignore=snakebids/project_template --benchmark-disable | |
| - name: remove spuriously include "Dancefile.inject" | |
| run: git clean -df | |
| - name: Check if there are changes | |
| id: changes | |
| run: | | |
| echo "changed=$(git diff-files --quiet && echo 0 || echo 1)" >> "$GITHUB_OUTPUT" | |
| - name: debug outputs | |
| run: | | |
| echo "Current # tests: ${{ steps.count.outputs.NUM }}" | |
| echo "Current # timed tests: ${{ steps.timed-count.outputs.NUM }}" | |
| echo "Changes?: ${{ steps.changes.outputs.changed }}" | |
| - name: Create PR | |
| if: steps.changes.outputs.changed == 1 | |
| uses: peter-evans/create-pull-request@v6 | |
| with: | |
| commit-message: Update test timings file | |
| branch: maint/update-test-timings | |
| title: Merge updated test timings | |
| labels: | | |
| maintenance | |
| skip_changelog | |
| body: > | |
| The number of tests has changed since the last generated test-timings | |
| file. This PR contains an automatically regenerated file. | |
| build-cache-env: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] | |
| steps: | |
| - uses: khanlab/actions/.github/actions/[email protected] | |
| id: setup | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache-key: pypi | |
| install-deps-only: dev | |
| install-library: false | |
| - name: build docker test container | |
| uses: ./.github/actions/build-test-container | |
| with: | |
| python-version: ${{ steps.setup.outputs.python-version }} | |
| load: true | |
| - name: install lib | |
| run: poetry run pip install . | |
| test: | |
| runs-on: ubuntu-latest | |
| needs: [ 'build-cache-env' ] | |
| strategy: | |
| matrix: | |
| python-version: ['3.8', '3.9', '3.10', '3.11', '3.12'] | |
| split: ['1', '2', '3', '4', '5'] | |
| fail-fast: false | |
| steps: | |
| - uses: khanlab/actions/.github/actions/[email protected] | |
| id: setup | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache-key: nightly | |
| install-deps-only: dev | |
| install-library: false | |
| - name: install lib | |
| run: poetry run pip install . | |
| - name: build docker test container | |
| uses: ./.github/actions/build-test-container | |
| with: | |
| python-version: ${{ steps.setup.outputs.python-version }} | |
| load: true | |
| - name: Test with pytest | |
| env: | |
| HYPOTHESIS_PROFILE: pr | |
| run: >- | |
| poetry run pytest -n auto --splits 5 --group ${{ matrix.split }} | |
| --doctest-modules --ignore=docs | |
| --ignore=snakebids/project_template --benchmark-disable |