Refactor install steps into resusable workflow #833
Workflow file for this run
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# This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
name: Test workflow | |
on: | |
push: | |
branches: | |
- '*' | |
- '!push-action/*' | |
pull_request: | |
branches: | |
- '*' | |
- '!push-action/*' | |
jobs: | |
quality: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Install | |
uses: khanlab/actions/.github/actions/[email protected] | |
with: | |
python-version: '3.11' | |
install-library: true | |
# run python style checks | |
- name: Poetry Lock Check | |
run: poetry check --lock | |
- name: isort | |
run: poetry run isort snakebids -c | |
- name: Black | |
run: poetry run black snakebids --check | |
- name: pyright | |
run: poetry run pyright snakebids | |
- name: ruff | |
run: poetry run ruff snakebids | |
build-cache-env: | |
runs-on: ubuntu-latest | |
needs: [ 'quality' ] | |
strategy: | |
matrix: | |
python-version: ['3.8', '3.9', '3.10', '3.11'] | |
steps: | |
- uses: khanlab/actions/.github/actions/[email protected] | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: setup docker | |
uses: ./.github/actions/build-test-container | |
with: | |
python-version: ${{ steps.setup-python.outputs.python-version }} | |
test: | |
runs-on: ubuntu-latest | |
needs: [ 'build-cache-env' ] | |
strategy: | |
matrix: | |
python-version: ['3.8', '3.9', '3.10', '3.11'] | |
split: ['1', '2', '3', '4', '5'] | |
fail-fast: false | |
steps: | |
- name: install | |
uses: khanlab/actions/.github/actions/[email protected] | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: build docker test container | |
uses: ./.github/actions/build-test-container | |
with: | |
python-version: ${{ steps.setup-python.outputs.python-version }} | |
- name: Test with pytest | |
env: | |
HYPOTHESIS_PROFILE: pr | |
run: >- | |
poetry run pytest -n auto --splits 5 --group ${{ matrix.split }} | |
--doctest-modules --ignore=docs | |
--ignore=snakebids/project_template --benchmark-disable | |
deployment_on_base: | |
runs-on: ubuntu-latest | |
if: ${{ contains(github.event_name, 'pull_request') }} | |
steps: | |
- name: Check for previous deployment on base | |
run: | | |
[[ $( | |
curl https://api.github.com/repos/${{ github.repository }}/releases | | |
jq '.[].target_commitish == "${{ github.event.pull_request.base.ref }}"' | | |
grep true | wc -l | |
) != 0 ]] |