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removes extra dependencies that are already in container
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akhanf committed Feb 14, 2024

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1 parent 63287d2 commit bc8ad06
Showing 2 changed files with 121 additions and 1,177 deletions.
1,286 changes: 120 additions & 1,166 deletions poetry.lock

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12 changes: 1 addition & 11 deletions pyproject.toml
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
[tool.poetry]
name = "bigstitcher-smk"
name = "SPIMprep"
version = "0.1.0"
description = ""
authors = ["Ali Khan <alik@robarts.ca>"]
@@ -9,17 +9,7 @@ packages = []
[tool.poetry.dependencies]
python = ">=3.11,<3.13"
snakemake = "^8.4.2"
snakemake-storage-plugin-gcs = "^0.1.3"
tifffile = "^2023.12.9"
xmltodict = "^0.13.0"
snakebids = "^0.10.0"
basicpy = "^1.1.0"
snakemake-executor-plugin-slurm = "^0.1.5"
snakemake-storage-plugin-fs = "^0.1.5"
npy2bdv = "^1.0.8"
zarr = "^2.16.1"
jax = "0.4.23"
jaxlib = "0.4.23"

[build-system]
requires = ["poetry-core"]

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