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akhanf authored Feb 20, 2024
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# Snakemake workflow: `SPIMprep`

[![Snakemake](https://img.shields.io/badge/snakemake-≥6.3.0-brightgreen.svg)](https://snakemake.github.io)
[![GitHub actions status](https://github.com/<owner>/<repo>/workflows/Tests/badge.svg?branch=main)](https://github.com/<owner>/<repo>/actions?query=branch%3Amain+workflow%3ATests)
[![GitHub actions status](https://github.com/khanlab/SPIMprep/workflows/Tests/badge.svg?branch=main)](https://github.com/khanlab/SPIMprep/actions?query=branch%3Amain+workflow%3ATests)

A Snakemake workflow for pre-processing single plane illumination microscopy (SPIM, aka lightsheet microscopy)

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