Version 1.70 on CRAN

DESCRIPTION

@@ -1,12 +1,62 @@
 Package: qtl
-Version: 1.67-3
-Date: 2024-08-16
+Version: 1.70
+Date: 2024-08-21
 Title: Tools for Analyzing QTL Experiments
-Author: Karl W Broman <[email protected]> and Hao Wu, with
-  ideas from Gary Churchill and Saunak Sen and contributions from
-  Danny Arends, Robert Corty, Timothee Flutre, Ritsert Jansen, Pjotr
-  Prins, Lars Ronnegard, Rohan Shah, Laura Shannon, Quoc Tran, Aaron
-  Wolen, Brian Yandell, and R Core Team
+Author: Karl W Broman [aut, cre] (<https://orcid.org/0000-0002-4914-6671>), Hao Wu [aut], Gary Churchill [ctb] (<https://orcid.org/0000-0001-9190-9284>), Saunak Sen [ctb] (<https://orcid.org/0000-0003-4519-6361>), Danny Arends [ctb] (<https://orcid.org/0000-0001-8738-0162>), Robert Corty [ctb], Timothee Flutre [ctb], Ritsert Jansen [ctb], Pjotr Prins [ctb] (<https://orcid.org/0000-0002-8021-9162>), Lars Ronnegard [ctb], Rohan Shah [ctb], Laura Shannon [ctb], Quoc Tran [ctb], Aaron Wolen [ctb], Brian Yandell [ctb] (<https://orcid.org/0000-0002-8774-9377>), R Core Team [ctb]
+Authors@R: c(person(given = c("Karl", "W"),
+                    family = "Broman",
+                    role = c("aut", "cre"),
+                    email = "[email protected]",
+                    comment=c(ORCID = "0000-0002-4914-6671")),
+             person(given = "Hao",
+                    family = "Wu",
+                    role = "aut"),
+             person(given = c("Gary"),
+                    family = "Churchill",
+                    role = "ctb",
+                    comment=c(ORCID = "0000-0001-9190-9284")),
+             person(given = "Saunak",
+                    family = "Sen",
+                    role = "ctb",
+                    comment=c(ORCID = "0000-0003-4519-6361")),
+             person(given = "Danny",
+                    family = "Arends",
+                    role = "ctb",
+                    comment=c(ORCID = "0000-0001-8738-0162")),
+             person(given = "Robert",
+                    family = "Corty",
+                    role = "ctb"),
+             person(given = "Timothee",
+                    family = "Flutre",
+                    role = "ctb"),
+             person(given = "Ritsert",
+                    family = "Jansen",
+                    role = "ctb"),
+             person(given = "Pjotr",
+                    family = "Prins",
+                    role = "ctb",
+                    comment=c(ORCID = "0000-0002-8021-9162")),
+             person(given = "Lars",
+                    family = "Ronnegard",
+                    role = "ctb"),
+             person(given = "Rohan",
+                    family = "Shah",
+                    role = "ctb"),
+             person(given = "Laura",
+                    family = "Shannon",
+                    role = "ctb"),
+             person(given = "Quoc",
+                    family = "Tran",
+                    role = "ctb"),
+             person(given = "Aaron",
+                    family = "Wolen",
+                    role = "ctb"),
+             person(given = "Brian",
+                    family = "Yandell",
+                    role = "ctb",
+                    comment=c(ORCID = "0000-0002-8774-9377")),
+             person("R Core Team",
+                    role = "ctb"))
 Maintainer: Karl W Broman <[email protected]>
 Description: Analysis of experimental crosses to identify genes
   (called quantitative trait loci, QTLs) contributing to variation in

NEWS.md

@@ -1,6 +1,6 @@
 # Revision history for the R/qtl package
 
-## Version 1.67-3, 2024-08-16
+## Version 1.70, 2024-08-21
 
 ### Minor changes
 
@@ -12,6 +12,8 @@
 - In mqmdatatypes.cpp, changed calls to warning() to calls to Rf_warning()
   to avoid compile error in R-devel.
 
+- Add Authors@R field in the Description file
+
 
 ## Version 1.66, 2023-11-27
 

inst/INSTALL_ME.txt

@@ -28,7 +28,7 @@ OBTAINING R/QTL
 INSTALLATION OF R AND R/QTL (Windows)
 
   1. The Windows version of R is distributed as a single file, with a
-     name something like R-4.3.2-win.exe.  Install R by executing
+     name something like R-4.4.1-win.exe.  Install R by executing
      this file.  We recommend installing R in "c:\R" rather than
      "c:\Program Files\R".  Why didn't Microsoft use "Programs" rather
      than "Program files"?
@@ -39,16 +39,16 @@ INSTALLATION OF R AND R/QTL (Windows)
 
      This will download the binary from CRAN and install it.
 
-     Alternatively, you can download the "qtl_1.66.zip" (or the
+     Alternatively, you can download the "qtl_1.70.zip" (or the
      equivalent).  Then start R and select (on the menu bar)
      "Packages" and then "Install package from local zip file...".
-     Find the file "qtl_1.66.zip" on your hard drive, and click
+     Find the file "qtl_1.70.zip" on your hard drive, and click
      "Open".
 
 
 INSTALLATION OF R AND R/QTL (MacOS version 10.13 and above)
 
-  1. Download the file R-4.3.2.pkg, double-click it, and follow the
+  1. Download the file R-4.4.1.pkg, double-click it, and follow the
      instructions.
 
   2. To install R/qtl, the simplest approach is to start R and type
@@ -58,7 +58,7 @@ INSTALLATION OF R AND R/QTL (MacOS version 10.13 and above)
      This will download the binary from CRAN and install it.
 
      Alternatively, download the compiled version of R/qtl for
-     Mac OS X, a file like "qtl_1.66.tgz".  Then start R and
+     Mac OS X, a file like "qtl_1.70.tgz".  Then start R and
      select (on the menu bar) "Packages & Data" -> "Package
      Installer".  Select "Local Binary Package" from the drop-down
      menu at the top of the window that comes up.  Click "Install"
@@ -78,19 +78,19 @@ INSTALLATION OF R/QTL (Unix)
      This will download the binary from CRAN and install it.
 
      Alternatively, download the R/qtl source code (a file like
-     "qtl_1.66.tar.gz").  Go into the directory containing the
+     "qtl_1.70.tar.gz").  Go into the directory containing the
      file and do one of the following:
 
      a. To install R/qtl in the standard location
         (/usr/local/lib/R/library), type
 
-            R CMD INSTALL qtl_1.66.tar.gz
+            R CMD INSTALL qtl_1.70.tar.gz
 
         You'll probably need to be superuser.
 
      b. To install the package locally, type
 
-            R CMD INSTALL --library=/home/auser/Rlibs qtl_1.66.tar.gz
+            R CMD INSTALL --library=/home/auser/Rlibs qtl_1.70.tar.gz
 
         (where "/home/auser/Rlibs" should be replaced with the
         appropriate directory).