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  1. Metabolic-modelling Metabolic-modelling Public

    Metabolic modelling for PhD work.

    Jupyter Notebook 1 1

  2. Proteomics-and-metabolomics Proteomics-and-metabolomics Public

    Coding for visualisation, clustering, performance analysis, and metabolic coverage. Continuation report.

    Jupyter Notebook 1

  3. overview_of_ccle_data overview_of_ccle_data Public

    pca of the ccle data to be used in this project

    Jupyter Notebook 1

  4. clustering_of_ccle_single_omics clustering_of_ccle_single_omics Public

    optimised clustering workflow applied to ccle proteomics and transcriptomics, ovarian cancer cell lines. to show initial separation of cell lines into histotypes, before GEM omics integration.

    Jupyter Notebook 1

  5. ovarian_genome_scale_modeling ovarian_genome_scale_modeling Public

    Repository to accompany transcriptomics integration method developed during the third year of my PhD

    Jupyter Notebook 1

  6. s2m2-2022 s2m2-2022 Public

    Forked from BioSystemsUM/s2m2

    Materials for the Summer School in Metabolic Modeling - 2022 edition

    Jupyter Notebook