Using McClintock pipeline to identify TEs:
Data located in /shared/projects/Onygenales/5mC/TEs on HPCC
Included scripts:
01_run_mcclintock.sh02_run_RepeadModeler.sh
McClintock error file:
/shared/projects/Onygenales/5mC/TEs/error.4259578.txt
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Analysis of 5mC and repeats in Onygenales fungi
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