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1. COMBINE-lab/salmon COMBINE-lab/salmon Public

   🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

   C++ 777 165

2. parazodiac/Indus parazodiac/Indus Public

   🔱 A wicked fast tool for combinatorial analysis of coassay data.

   Rust 2

3. 10XGenomics/rust-pseudoaligner 10XGenomics/rust-pseudoaligner Public

   Single-Cell RNA-seq pseudo-aligner

   Rust 50 14

4. parazodiac/SingleCellExperiment parazodiac/SingleCellExperiment Public

   🦀 Oxidized Single Cell Experiment

   Rust 2 1

5. parazodiac/Volans parazodiac/Volans Public

   🐠 A fast pipeline to preprocess the ATAC-seq data.

   Rust 3

6. 10XGenomics/rust-boomphf 10XGenomics/rust-boomphf Public

   Fast and scalable minimal perfect hashing for massive key sets

   Rust 132 27