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Merge pull request #17 from juglab/merger
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Merger
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tibuch authored Mar 19, 2021
2 parents 4a0fff1 + d6f6a3b commit 3ba3041
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4 changes: 2 additions & 2 deletions README.md
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Expand Up @@ -6,7 +6,7 @@ Build Python package:
`python setup.py bdist_wheel`

Build singularity recipe:
`neurodocker generate singularity -b nvidia/cuda:10.2-cudnn7-devel-ubuntu18.04 -p apt --copy /home/tibuch/Gitrepos/FourierImageTransformer/dist/fourier_image_transformers-0.1.20-py3-none-any.whl /fourier_image_transformers-0.1.20-py3-none-any.whl --miniconda create_env=fit conda_install='python=3.7 astra-toolbox pytorch torchvision torchaudio cudatoolkit=10.2 -c pytorch -c astra-toolbox/label/dev' pip_install='/fourier_image_transformers-0.1.20-py3-none-any.whl' activate=true --entrypoint "/neurodocker/startup.sh python" > v0.1.20.Singularity`
`neurodocker generate singularity -b nvidia/cuda:10.2-cudnn7-devel-ubuntu18.04 -p apt --copy /home/tibuch/Gitrepos/FourierImageTransformer/dist/fourier_image_transformers-0.1.24_zero-py3-none-any.whl /fourier_image_transformers-0.1.24_zero-py3-none-any.whl --miniconda create_env=fit conda_install='python=3.7 astra-toolbox pytorch torchvision torchaudio cudatoolkit=10.2 -c pytorch -c astra-toolbox/label/dev' pip_install='/fourier_image_transformers-0.1.24_zero-py3-none-any.whl' activate=true --entrypoint "/neurodocker/startup.sh python" > v0.1.24_zero.Singularity`

Build singularity container:
`sudo singularity build fit_v0.1.20.simg v0.1.20.Singularity`
`sudo singularity build fit_v0.1.24_zero.simg v0.1.24_zero.Singularity`
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