Feature/greedy string tiling deterministic

.gitattributes

@@ -1,2 +1,5 @@
 # Set the default behavior, in case people don't have core.autocrlf set.
 * text=auto
+
+*.emfatic text
+*.treeview text

.github/workflows/docs.yml

@@ -0,0 +1,36 @@
+name: Documentation
+
+on:
+  push:
+    branches:
+      - main
+    tags: "v**"
+    paths:
+      - 'docs/**'
+      - '.github/workflows/docs.yml'
+  workflow_dispatch:
+
+jobs:
+  docs:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+        with:
+          token: ${{ secrets.SDQ_DEV_DEPLOY_TOKEN }}
+      - uses: actions/checkout@v4
+        with:
+          repository: ${{ github.repository }}.wiki
+          path: wiki
+          token: ${{ secrets.SDQ_DEV_DEPLOY_TOKEN }}
+
+      - name: Remove contents in Wiki
+        working-directory: wiki
+        run: ls -A1 | grep -v '.git' | xargs rm -r
+
+      - name: Copy Wiki from Docs folder
+        run: cp -r ./docs/. ./wiki
+
+      - name: Deploy 🚀
+        uses: stefanzweifel/git-auto-commit-action@v5
+        with:
+          repository: wiki

.github/workflows/maven.yml

@@ -2,8 +2,18 @@ name: Build
 
 on:
   push: 
+    paths:
+      - ".github/workflows/maven.yml"
+      - "**/pom.xml"
+      - "**.java"
+      - "**.g4"
   pull_request:
     types: [opened, synchronize, reopened]
+    paths:
+      - ".github/workflows/maven.yml"
+      - "**/pom.xml"
+      - "**.java"
+      - "**.g4"
 
   # Allows you to run this workflow manually from the Actions tab
   workflow_dispatch:
@@ -26,7 +36,7 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
 
     - name: Set up JDK
       uses: actions/setup-java@v3

.github/workflows/publish.yml

@@ -7,7 +7,7 @@ jobs:
   publish-maven-central:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - uses: actions/setup-java@v3
         with:
           java-version: '17'
@@ -17,7 +17,7 @@ jobs:
         with:
           servers: '[{ "id": "ossrh", "username": "jplag", "password": "${{ secrets.OSSRH_TOKEN }}" }]'
       - name: Import GPG key
-        uses: crazy-max/ghaction-import-gpg@v5
+        uses: crazy-max/ghaction-import-gpg@v6
         with:
           gpg_private_key: ${{ secrets.PGP_SECRET }}
           passphrase: ${{ secrets.PGP_PW }}
@@ -29,7 +29,7 @@ jobs:
   publish-release-artifact:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - uses: actions/setup-java@v3
         with:
           java-version: '17'

.github/workflows/report-viewer-test.yml → .github/workflows/report-viewer-build-test.yml

@@ -4,6 +4,9 @@ on:
  workflow_dispatch:
  pull_request:
     types: [opened, synchronize, reopened]
+    paths:
+      - ".github/workflows/report-viewer-build-test.yml"
+      - "report-viewer/**"
 
 jobs:
   pre_job:
@@ -23,11 +26,11 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout 🛎️
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
 
       - uses: actions/setup-node@v3
         with:
-          node-version: "16"
+          node-version: "18"
 
       - name: Set version of Report Viewer
         shell: bash

.github/workflows/report-viewer-dev.yml

@@ -5,17 +5,20 @@ on:
  push:
     branches:
       - develop
+    paths:
+      - ".github/workflows/report-viewer-dev.yml"
+      - "report-viewer/**"
 
 jobs:
   build-and-deploy:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout 🛎️
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
 
       - uses: actions/setup-node@v3
         with:
-          node-version: "16"
+          node-version: "18"
 
       - name: Set version of Report Viewer
         shell: bash
@@ -34,10 +37,10 @@ jobs:
         working-directory: report-viewer
         run: |
           npm install
-          npm run build
+          npm run build-dev
 
       - name: Deploy 🚀
-        uses: JamesIves/[email protected].0
+        uses: JamesIves/[email protected].3
         with:
           branch: gh-pages
           folder: report-viewer/dist

.github/workflows/report-viewer-e2e.yml

@@ -0,0 +1,40 @@
+name: Report Viewer e2e Test
+
+on:
+  workflow_dispatch:
+  pull_request:
+    types: [opened, synchronize, reopened]
+    paths:
+      - ".github/workflows/report-viewer-e2e.yml"
+      - "report-viewer/**"
+
+jobs:
+  pre_job:
+    runs-on: ubuntu-latest
+    outputs:
+      should_skip: ${{ steps.skip_check.outputs.should_skip }}
+    steps:
+      - id: skip_check
+        uses: fkirc/skip-duplicate-actions@master
+        with:
+          concurrent_skipping: 'same_content_newer'
+          skip_after_successful_duplicate: 'true'
+
+  test:
+    needs: pre_job
+    if: ${{ needs.pre_job.outputs.should_skip != 'true' }}
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout 🛎️
+        uses: actions/checkout@v4
+
+      - uses: actions/setup-node@v3
+        with:
+          node-version: "18"
+
+      - name: Install and Test 🧪
+        working-directory: report-viewer
+        run: |
+          npm install
+          npx playwright install --with-deps
+          npm run test:e2e

.github/workflows/report-viewer-lint.yml

@@ -0,0 +1,44 @@
+name: Report Viewer ESLint Workflow # Checks linting of report viewer
+
+
+on:
+  workflow_dispatch:
+  push:
+    paths:
+      - ".github/workflows/report-viewer-lint.yml"
+      - "report-viewer/**"
+  pull_request:
+    types: [opened, synchronize, reopened]
+    paths:
+      - ".github/workflows/report-viewer-lint.yml"
+      - "report-viewer/**"
+
+jobs:
+  pre_job:
+    runs-on: ubuntu-latest
+    outputs:
+      should_skip: ${{ steps.skip_check.outputs.should_skip }}
+    steps:
+      - id: skip_check
+        uses: fkirc/skip-duplicate-actions@master
+        with:
+          concurrent_skipping: 'same_content_newer'
+          skip_after_successful_duplicate: 'true'
+
+  check:
+    needs: pre_job
+    if: ${{ needs.pre_job.outputs.should_skip != 'true' }}
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout 🛎️
+        uses: actions/checkout@v4
+
+      - uses: actions/setup-node@v3
+        with:
+          node-version: "18"
+
+      - name: Install and Lint 🎨
+        working-directory: report-viewer
+        run: |
+          npm install
+          npm run lint

.github/workflows/report-viewer-prettier.yml

@@ -0,0 +1,45 @@
+name: Report Viewer Prettier Check Workflow # Checks the report viewer against the prettier rules
+
+on:
+  workflow_dispatch:
+  push:
+    paths:
+      - ".github/workflows/report-viewer-prettier.yml"
+      - "report-viewer/**"
+  pull_request:
+    types: [opened, synchronize, reopened]
+    paths:
+      - ".github/workflows/report-viewer-prettier.yml"
+      - "report-viewer/**"
+
+
+jobs:
+  pre_job:
+    runs-on: ubuntu-latest
+    outputs:
+      should_skip: ${{ steps.skip_check.outputs.should_skip }}
+    steps:
+      - id: skip_check
+        uses: fkirc/skip-duplicate-actions@master
+        with:
+          concurrent_skipping: 'same_content_newer'
+          skip_after_successful_duplicate: 'true'
+
+  check:
+    needs: pre_job
+    if: ${{ needs.pre_job.outputs.should_skip != 'true' }}
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout 🛎️
+        uses: actions/checkout@v4
+
+      - uses: actions/setup-node@v3
+        with:
+          node-version: "18"
+
+      - name: Install and Check 🎨
+        working-directory: report-viewer
+        run: |
+          npm install
+          npx prettier --check src/**/*.ts
+          npx prettier --check src/**/*.vue

.github/workflows/report-viewer-sonarcloud.yml

@@ -0,0 +1,35 @@
+name: SonarCloud Scan (ReportViewer)
+
+on:
+  push:
+    branches:
+      - main
+      - develop
+    paths:
+      - "report-viewer/**"
+      - ".github/workflows/sonarcloud-report-viewer.yml"
+  pull_request:
+    types: [opened, synchronize, reopened]
+    paths:
+      - "report-viewer/**"
+      - ".github/workflows/sonarcloud-report-viewer.yml"
+
+      # Allows you to run this workflow manually from the Actions tab
+  workflow_dispatch:
+
+jobs:
+  sonarcloud:
+    name: SonarCloud
+    runs-on: ubuntu-latest
+    if: ${{ github.actor != 'dependabot[bot]' }}
+    steps:
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0  # Shallow clones should be disabled for a better relevancy of analysis
+      - name: SonarCloud Scan
+        uses: SonarSource/sonarcloud-github-action@master
+        with:
+          projectBaseDir: report-viewer
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+          SONAR_TOKEN: ${{ secrets.SONAR_TOKEN_REPORT_VIEWER }}

.github/workflows/report-viewer-unit.yml

@@ -0,0 +1,39 @@
+name: Report Viewer Unit Test
+
+on:
+  workflow_dispatch:
+  pull_request:
+    types: [opened, synchronize, reopened]
+    paths:
+      - ".github/workflows/report-viewer-unit.yml"
+      - "report-viewer/**"
+
+jobs:
+  pre_job:
+    runs-on: ubuntu-latest
+    outputs:
+      should_skip: ${{ steps.skip_check.outputs.should_skip }}
+    steps:
+      - id: skip_check
+        uses: fkirc/skip-duplicate-actions@master
+        with:
+          concurrent_skipping: 'same_content_newer'
+          skip_after_successful_duplicate: 'true'
+
+  test:
+    needs: pre_job
+    if: ${{ needs.pre_job.outputs.should_skip != 'true' }}
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout 🛎️
+        uses: actions/checkout@v4
+
+      - uses: actions/setup-node@v3
+        with:
+          node-version: "18"
+
+      - name: Install and Test 🧪
+        working-directory: report-viewer
+        run: |
+          npm install
+          npm run test:unit

.github/workflows/report-viewer.yml

@@ -11,11 +11,11 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout 🛎️
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
 
       - uses: actions/setup-node@v3
         with:
-          node-version: "16"
+          node-version: "18"
 
       - name: Set version of Report Viewer
         shell: bash
@@ -34,10 +34,10 @@ jobs:
         working-directory: report-viewer
         run: |
           npm install
-          npm run build
+          npm run build-prod
 
       - name: Deploy 🚀
-        uses: JamesIves/[email protected].0
+        uses: JamesIves/[email protected].3
         with:
           branch: gh-pages
           folder: report-viewer/dist