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Fix starting tree guidelines
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jordandouglas authored Jul 25, 2023
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Expand Up @@ -74,6 +74,13 @@ Please note that these xml files are dependent on the 'FastRelaxedClockLogNormal



## Fixing the tree topology

To fix the starting tree, please refer to the [Fix starting tree](https://www.beast2.org/fix-starting-tree/) blog post.

If the optimised relaxed clock is also being used, then this operator also needs to be switched off: `id="ORCAdaptableOperatorSampler_NER.c..."`. This operator performs a narrow exchange topology operation, while also accounting for branch rates.


## Citation

Jordan Douglas, Rong Zhang,Remco Bouckaert.
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