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Merge pull request galaxyproject#17414 from jdavcs/23.2_packages_build_1
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[23.2] Cleanup versions, formatting in setup.cfg, HISTORY.rst in all packages
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mvdbeek authored Feb 6, 2024
2 parents 0e499dc + 019c495 commit 7ff64b7
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67 changes: 3 additions & 64 deletions packages/app/HISTORY.rst
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.. to_doc
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23.2rc1
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23.2.dev0
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Expand Down Expand Up @@ -60,8 +60,6 @@ Enhancements
Bug fixes
=========

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* read job_conf directly from `config_dir` instead of computing it again from `config_file` by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#15596 <https://github.com/galaxyproject/galaxy/pull/15596>`_
* Fix some drs handling issues by `@nuwang <https://github.com/nuwang>`_ in `#15777 <https://github.com/galaxyproject/galaxy/pull/15777>`_
* Fix filesource file url support by `@nuwang <https://github.com/nuwang>`_ in `#15794 <https://github.com/galaxyproject/galaxy/pull/15794>`_
Expand Down Expand Up @@ -117,8 +115,6 @@ Bug fixes
Enhancements
============

*
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* Empower Users to Select Storage Destination by `@jmchilton <https://github.com/jmchilton>`_ in `#14073 <https://github.com/galaxyproject/galaxy/pull/14073>`_
* External Login Flow: Redirect users if account already exists by `@ahmedhamidawan <https://github.com/ahmedhamidawan>`_ in `#15019 <https://github.com/galaxyproject/galaxy/pull/15019>`_
* Add slack error reporting plugin by `@hexylena <https://github.com/hexylena>`_ in `#15025 <https://github.com/galaxyproject/galaxy/pull/15025>`_
Expand Down Expand Up @@ -204,9 +200,6 @@ Other changes
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* Fix upload paramfile handling (for real user setups) by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#16504 <https://github.com/galaxyproject/galaxy/pull/16504>`_
* Fix extra files path handling by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16541 <https://github.com/galaxyproject/galaxy/pull/16541>`_
* Make sure job_wrapper uses a consistent metadata strategy by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16569 <https://github.com/galaxyproject/galaxy/pull/16569>`_
Expand All @@ -220,9 +213,6 @@ Bug fixes
Enhancements
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* Update pulsar client library to 0.15.5 by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16701 <https://github.com/galaxyproject/galaxy/pull/16701>`_

-------------------
Expand All @@ -234,10 +224,6 @@ Enhancements
Bug fixes
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* Skip installing npm/yarn if available, fix conditional dependency parsing, create virtualenv via conda when conda active by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#16403 <https://github.com/galaxyproject/galaxy/pull/16403>`_
* Fix test discovery in vscode by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16413 <https://github.com/galaxyproject/galaxy/pull/16413>`_
* Fixes for (gitlab) error reporting by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#16424 <https://github.com/galaxyproject/galaxy/pull/16424>`_
Expand All @@ -251,11 +237,6 @@ Bug fixes
Bug fixes
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* Fix default when statement evaluation by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16332 <https://github.com/galaxyproject/galaxy/pull/16332>`_
* Redact private role name and description when purging user by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16349 <https://github.com/galaxyproject/galaxy/pull/16349>`_

Expand All @@ -268,31 +249,18 @@ Bug fixes
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* Bump galaxy-release-util version to 0.1.2 by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16241 <https://github.com/galaxyproject/galaxy/pull/16241>`_

============
Enhancements
============

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* When importing tool data bundles, use the first loc file for the matching table by `@natefoo <https://github.com/natefoo>`_ in `#16247 <https://github.com/galaxyproject/galaxy/pull/16247>`_

=============
Other changes
=============

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* Forward port of slugify username received from oidc by `@nuwang <https://github.com/nuwang>`_ in `#16271 <https://github.com/galaxyproject/galaxy/pull/16271>`_

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Expand All @@ -304,26 +272,12 @@ Other changes
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* Fix ``Text File Busy`` errors at the source by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16212 <https://github.com/galaxyproject/galaxy/pull/16212>`_

============
Enhancements
============

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* Point release deps fixes and docs by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16214 <https://github.com/galaxyproject/galaxy/pull/16214>`_
* Use galaxy-release-util to upload python packages by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16240 <https://github.com/galaxyproject/galaxy/pull/16240>`_

Expand All @@ -336,14 +290,6 @@ Enhancements
Bug fixes
=========

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* Display DCE in job parameter component, allow rerunning with DCE input by `@mvdbeek <https://github.com/mvdbeek>`_ in `#15744 <https://github.com/galaxyproject/galaxy/pull/15744>`_
* Fix mixed outputs_to_working_directory pulsar destinations by `@mvdbeek <https://github.com/mvdbeek>`_ in `#15927 <https://github.com/galaxyproject/galaxy/pull/15927>`_
* Update Gravity to 1.0.3 by `@natefoo <https://github.com/natefoo>`_ in `#15939 <https://github.com/galaxyproject/galaxy/pull/15939>`_
Expand All @@ -367,13 +313,6 @@ Bug fixes
Other changes
=============

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* Startup fix when tool removed between reboot by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16175 <https://github.com/galaxyproject/galaxy/pull/16175>`_

-------------------
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2 changes: 1 addition & 1 deletion packages/app/setup.cfg
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Expand Up @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
long_description_content_type = text/x-rst
name = galaxy-app
url = https://github.com/galaxyproject/galaxy
version = 23.1.dev0
version = 23.2.dev0

[options]
include_package_data = True
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6 changes: 3 additions & 3 deletions packages/auth/HISTORY.rst
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.. to_doc
-------
23.2rc1
-------
---------
23.2.dev0
---------



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2 changes: 1 addition & 1 deletion packages/auth/setup.cfg
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Expand Up @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
long_description_content_type = text/x-rst
name = galaxy-auth
url = https://github.com/galaxyproject/galaxy
version = 23.1.dev0
version = 23.2.dev0

[options]
include_package_data = True
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21 changes: 3 additions & 18 deletions packages/config/HISTORY.rst
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.. to_doc
-------
23.2rc1
-------
---------
23.2.dev0
---------



Expand Down Expand Up @@ -48,8 +48,6 @@ Enhancements
Bug fixes
=========

*
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* Fix some drs handling issues by `@nuwang <https://github.com/nuwang>`_ in `#15777 <https://github.com/galaxyproject/galaxy/pull/15777>`_
* Improve container resolver documentation by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16280 <https://github.com/galaxyproject/galaxy/pull/16280>`_
* Limit tool document cache to tool configs with explicit cache path by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16537 <https://github.com/galaxyproject/galaxy/pull/16537>`_
Expand All @@ -60,8 +58,6 @@ Bug fixes
Enhancements
============

*
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* External Login Flow: Redirect users if account already exists by `@ahmedhamidawan <https://github.com/ahmedhamidawan>`_ in `#15019 <https://github.com/galaxyproject/galaxy/pull/15019>`_
* Add slack error reporting plugin by `@hexylena <https://github.com/hexylena>`_ in `#15025 <https://github.com/galaxyproject/galaxy/pull/15025>`_
* Documents use of k8s_extra_job_envs in job_conf sample advanced by `@pcm32 <https://github.com/pcm32>`_ in `#15110 <https://github.com/galaxyproject/galaxy/pull/15110>`_
Expand Down Expand Up @@ -105,9 +101,6 @@ No recorded changes since last release
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* Minor bug fix for default mail templates by `@neoformit <https://github.com/neoformit>`_ in `#16362 <https://github.com/galaxyproject/galaxy/pull/16362>`_

-------------------
Expand Down Expand Up @@ -137,20 +130,12 @@ No recorded changes since last release
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* Change default watchdog inotify_buffer log level to info by `@mvdbeek <https://github.com/mvdbeek>`_ in `#15967 <https://github.com/galaxyproject/galaxy/pull/15967>`_

============
Enhancements
============

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* Add ``ca_certs`` option for sentry client by `@mvdbeek <https://github.com/mvdbeek>`_ in `#15943 <https://github.com/galaxyproject/galaxy/pull/15943>`_

-------------------
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2 changes: 1 addition & 1 deletion packages/config/setup.cfg
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Expand Up @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
long_description_content_type = text/x-rst
name = galaxy-config
url = https://github.com/galaxyproject/galaxy
version = 23.1.dev0
version = 23.2.dev0

[options]
include_package_data = True
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23 changes: 3 additions & 20 deletions packages/data/HISTORY.rst
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Expand Up @@ -3,9 +3,9 @@ History

.. to_doc
-------
23.2rc1
-------
---------
23.2.dev0
---------



Expand Down Expand Up @@ -46,7 +46,6 @@ Bug fixes
Bug fixes
=========

*
* Skip change_datatype things if we're not actually changing the extension by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16931 <https://github.com/galaxyproject/galaxy/pull/16931>`_
* Fix copying metadata to copied job outputs by `@mvdbeek <https://github.com/mvdbeek>`_ in `#17007 <https://github.com/galaxyproject/galaxy/pull/17007>`_
* Update tar_to_directory dependency by `@mvdbeek <https://github.com/mvdbeek>`_ in `#17009 <https://github.com/galaxyproject/galaxy/pull/17009>`_
Expand All @@ -70,8 +69,6 @@ Enhancements
Bug fixes
=========

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* Fix bad auto-merge of dev. by `@jmchilton <https://github.com/jmchilton>`_ in `#15386 <https://github.com/galaxyproject/galaxy/pull/15386>`_
* Merge conflicting db migration branches into one by `@jdavcs <https://github.com/jdavcs>`_ in `#15771 <https://github.com/galaxyproject/galaxy/pull/15771>`_
* Enable ``strict_equality`` mypy option by `@nsoranzo <https://github.com/nsoranzo>`_ in `#15808 <https://github.com/galaxyproject/galaxy/pull/15808>`_
Expand Down Expand Up @@ -102,8 +99,6 @@ Bug fixes
Enhancements
============

*
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* Empower Users to Select Storage Destination by `@jmchilton <https://github.com/jmchilton>`_ in `#14073 <https://github.com/galaxyproject/galaxy/pull/14073>`_
* Add Storage Dashboard visualizations for histories by `@davelopez <https://github.com/davelopez>`_ in `#14820 <https://github.com/galaxyproject/galaxy/pull/14820>`_
* Towards decoupling datatypes and model by `@jdavcs <https://github.com/jdavcs>`_ in `#15186 <https://github.com/galaxyproject/galaxy/pull/15186>`_
Expand Down Expand Up @@ -162,9 +157,6 @@ Other changes
Bug fixes
=========

*
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* Fix extra files path handling by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16541 <https://github.com/galaxyproject/galaxy/pull/16541>`_
* Don't fail invocation message without dependent_workflow_step_id by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16628 <https://github.com/galaxyproject/galaxy/pull/16628>`_

Expand All @@ -177,10 +169,6 @@ Bug fixes
Bug fixes
=========

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* Copy when_expression when copying workflow step by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16377 <https://github.com/galaxyproject/galaxy/pull/16377>`_

-------------------
Expand Down Expand Up @@ -210,11 +198,6 @@ No recorded changes since last release
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=========

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* Display DCE in job parameter component, allow rerunning with DCE input by `@mvdbeek <https://github.com/mvdbeek>`_ in `#15744 <https://github.com/galaxyproject/galaxy/pull/15744>`_
* Fix folder listing via file browser by `@mvdbeek <https://github.com/mvdbeek>`_ in `#15950 <https://github.com/galaxyproject/galaxy/pull/15950>`_
* Fix RO-crate invocation export with complex collections by `@davelopez <https://github.com/davelopez>`_ in `#15971 <https://github.com/galaxyproject/galaxy/pull/15971>`_
Expand Down
2 changes: 1 addition & 1 deletion packages/data/setup.cfg
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Expand Up @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
long_description_content_type = text/x-rst
name = galaxy-data
url = https://github.com/galaxyproject/galaxy
version = 23.1.dev0
version = 23.2.dev0

[options]
include_package_data = True
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11 changes: 3 additions & 8 deletions packages/files/HISTORY.rst
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Expand Up @@ -3,9 +3,9 @@ History

.. to_doc
-------
23.2rc1
-------
---------
23.2.dev0
---------



Expand Down Expand Up @@ -46,8 +46,6 @@ Bug fixes
Bug fixes
=========

*
*
* Fix some drs handling issues by `@nuwang <https://github.com/nuwang>`_ in `#15777 <https://github.com/galaxyproject/galaxy/pull/15777>`_
* Fix filesource file url support by `@nuwang <https://github.com/nuwang>`_ in `#15794 <https://github.com/galaxyproject/galaxy/pull/15794>`_
* Fix unittest mocks to support us checking geturl() by `@dannon <https://github.com/dannon>`_ in `#16726 <https://github.com/galaxyproject/galaxy/pull/16726>`_
Expand Down Expand Up @@ -92,9 +90,6 @@ No recorded changes since last release
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=========

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* Fix dropbox import to support newer versions by `@nuwang <https://github.com/nuwang>`_ in `#16239 <https://github.com/galaxyproject/galaxy/pull/16239>`_

-------------------
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2 changes: 1 addition & 1 deletion packages/files/setup.cfg
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Expand Up @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
long_description_content_type = text/x-rst
name = galaxy-files
url = https://github.com/galaxyproject/galaxy
version = 23.1.dev0
version = 23.2.dev0

[options]
include_package_data = True
Expand Down
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