Initial bug fixes for tool shed 2. #2820
Workflow file for this run
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| name: Toolshed tests | ||
| on: | ||
| push: | ||
| paths-ignore: | ||
| - 'doc/**' | ||
| - 'lib/galaxy_test/selenium/**' | ||
| pull_request: | ||
| paths-ignore: | ||
| - 'doc/**' | ||
| - 'lib/galaxy_test/selenium/**' | ||
| env: | ||
| GALAXY_TEST_DBURI: 'postgresql://postgres:postgres@localhost:5432/galaxy?client_encoding=utf8' | ||
| TOOL_SHED_TEST_DBURI: 'postgresql://postgres:postgres@localhost:5432/toolshed?client_encoding=utf8' | ||
| concurrency: | ||
| group: ${{ github.workflow }}-${{ github.ref }} | ||
| cancel-in-progress: true | ||
| jobs: | ||
| test: | ||
| name: Test | ||
| runs-on: ubuntu-latest | ||
| strategy: | ||
| matrix: | ||
| include: | ||
| - test-install-client: 'galaxy_api' | ||
| python-version: '3.7' | ||
| shed-api: 'v1' | ||
| shed-browser: 'twill' | ||
| - test-install-client: 'standalone' | ||
| python-version: '3.8' | ||
| shed-api: 'v1' | ||
| shed-browser: 'twill' | ||
| - test-install-client: 'galaxy_api' | ||
| python-version: '3.9' | ||
| shed-api: 'v2' | ||
| shed-browser: 'playwright' | ||
| - test-install-client: 'standalone' | ||
| python-version: '3.10' | ||
| shed-api: 'v2' | ||
| shed-browser: 'playwright' | ||
| services: | ||
| postgres: | ||
| image: postgres:13 | ||
| env: | ||
| POSTGRES_USER: postgres | ||
| POSTGRES_PASSWORD: postgres | ||
| POSTGRES_DB: postgres | ||
| ports: | ||
| - 5432:5432 | ||
| steps: | ||
| - uses: actions/checkout@v3 | ||
| with: | ||
| path: 'galaxy root' | ||
| - uses: actions/setup-python@v4 | ||
| with: | ||
| python-version: ${{ matrix.python-version }} | ||
| - name: Get full Python version | ||
| id: full-python-version | ||
| shell: bash | ||
| run: echo "version=$(python -c 'import sys; print("-".join(str(v) for v in sys.version_info))')" >> $GITHUB_OUTPUT | ||
| - name: Cache pip dir | ||
| uses: actions/cache@v3 | ||
| id: pip-cache | ||
| with: | ||
| path: ~/.cache/pip | ||
| key: pip-cache-${{ matrix.python-version }}-${{ hashFiles('galaxy root/requirements.txt') }} | ||
| - name: Cache galaxy venv | ||
| uses: actions/cache@v3 | ||
| with: | ||
| path: 'galaxy root/.venv' | ||
| key: gxy-venv-${{ runner.os }}-${{ steps.full-python-version.outputs.version }}-${{ hashFiles('galaxy root/requirements.txt') }}-toolshed | ||
| key: gxy-venv-${{ runner.os }}-${{ steps.full-python-version.outputs.version }}-${{ hashFiles('galaxy_root/requirements.txt') }}-toolshed | ||
| - name: Install dependencies | ||
| run: ./scripts/common_startup.sh --skip-client-build | ||
| working-directory: 'galaxy root' | ||
| - name: Build Frontend | ||
| run: '. .venv/bin/activate && cd lib/tool_shed/webapp/frontend && yarn && make client' | ||
| working-directory: 'galaxy root' | ||
| - name: Install playwright | ||
| run: '. .venv/bin/activate && playwright install' | ||
| working-directory: 'galaxy root' | ||
| - name: Run tests | ||
| run: './run_tests.sh -toolshed' | ||
| env: | ||
| TOOL_SHED_TEST_INSTALL_CLIENT: ${{ matrix.test-install-client }} | ||
| TOOL_SHED_API_VERSION: ${{ matrix.shed-api }} | ||
| TOOL_SHED_TEST_BROWSER: ${{ matrix.shed-browser }} | ||
| working-directory: 'galaxy root' | ||
| - uses: actions/upload-artifact@v3 | ||
| if: failure() | ||
| with: | ||
| name: Toolshed test results (${{ matrix.python-version }}, ${{ matrix.test-install-client }}) | ||
| path: 'galaxy root/run_toolshed_tests.html' | ||
